The 2.0 version of rSNPBase

Variant report

Variant rs3756942
Chromosome Location chr6:119500712-119500713
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:119491800-119501000 Weak transcription Fetal Intestine Large intestine
2 chr6:119491800-119531200 Weak transcription Primary neutrophils fromperipheralblood blood
3 chr6:119492000-119507200 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr6:119492200-119505400 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr6:119492200-119527800 Weak transcription NHEK skin
6 chr6:119492400-119524200 Weak transcription Fetal Stomach stomach
7 chr6:119492600-119505600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr6:119493600-119518000 Weak transcription HUES6 Cell Line embryonic stem cell
9 chr6:119494000-119523600 Weak transcription GM12878-XiMat blood
10 chr6:119494400-119501000 Weak transcription Stomach Smooth Muscle stomach
11 chr6:119494600-119547400 Weak transcription Esophagus oesophagus
12 chr6:119494800-119501000 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr6:119494800-119505200 Weak transcription Fetal Muscle Leg muscle
14 chr6:119494800-119526200 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr6:119495000-119506000 Weak transcription Fetal Intestine Small intestine
16 chr6:119495200-119507200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr6:119495200-119507400 Weak transcription Pancreas Pancrea
18 chr6:119495400-119522000 Weak transcription Colon Smooth Muscle Colon
19 chr6:119495600-119522200 Weak transcription Fetal Kidney kidney
20 chr6:119496600-119501200 Weak transcription Fetal Muscle Trunk muscle
21 chr6:119496600-119507400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr6:119497000-119512600 Weak transcription Muscle Satellite Cultured Cells --
23 chr6:119497000-119524000 Weak transcription NHLF lung
24 chr6:119497000-119524400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr6:119497000-119524400 Weak transcription Small Intestine intestine
26 chr6:119497200-119501000 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr6:119497200-119518600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr6:119497400-119501000 Weak transcription Primary T regulatory cells fromperipheralblood blood
29 chr6:119497400-119502600 Weak transcription NHDF-Ad bronchial
30 chr6:119497400-119507600 Weak transcription Aorta Aorta
31 chr6:119498000-119503800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr6:119498000-119504200 Strong transcription Adipose Nuclei Adipose
33 chr6:119498000-119504600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr6:119498000-119536600 Weak transcription Fetal Heart heart
35 chr6:119498200-119500800 Weak transcription Placenta Placenta
36 chr6:119498200-119501000 Weak transcription Fetal Lung lung
37 chr6:119498200-119501600 Weak transcription Primary T cells fromperipheralblood blood
38 chr6:119498200-119506800 Weak transcription Spleen Spleen
39 chr6:119498200-119527400 Strong transcription Liver Liver
40 chr6:119498600-119508400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr6:119498600-119508600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr6:119498600-119517600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr6:119498600-119531400 Strong transcription HepG2 liver
44 chr6:119498800-119526800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
45 chr6:119499000-119501000 Weak transcription Primary T helper cells fromperipheralblood blood
46 chr6:119499000-119517200 Strong transcription Primary hematopoietic stem cells blood
47 chr6:119499200-119501000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
48 chr6:119499400-119501000 Weak transcription Primary B cells from peripheral blood blood
49 chr6:119499400-119501000 Weak transcription Left Ventricle heart
50 chr6:119499400-119516200 Weak transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015