The 2.0 version of rSNPBase

Variant report

Variant rs6915998
Chromosome Location chr6:119652595-119652596
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:119625200-119668600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr6:119627800-119667000 Weak transcription Gastric stomach
3 chr6:119636000-119661600 Weak transcription Colonic Mucosa Colon
4 chr6:119636200-119661600 Weak transcription NHDF-Ad bronchial
5 chr6:119636200-119662000 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr6:119636200-119667400 Weak transcription Right Ventricle heart
7 chr6:119636200-119667800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr6:119636400-119656000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr6:119636600-119655800 Weak transcription Primary monocytes fromperipheralblood blood
10 chr6:119637200-119656600 Weak transcription Primary B cells from peripheral blood blood
11 chr6:119639800-119655800 Weak transcription Primary neutrophils fromperipheralblood blood
12 chr6:119641400-119668200 Weak transcription Fetal Muscle Trunk muscle
13 chr6:119642800-119656000 Weak transcription Ovary ovary
14 chr6:119644200-119667000 Weak transcription Primary T cells fromperipheralblood blood
15 chr6:119644600-119661800 Weak transcription Primary T helper cells PMA-I stimulated --
16 chr6:119644800-119661400 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr6:119645000-119652800 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr6:119645000-119659600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr6:119645000-119668200 Weak transcription Aorta Aorta
20 chr6:119645200-119661800 Weak transcription Fetal Kidney kidney
21 chr6:119645400-119653000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr6:119645600-119652800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr6:119645800-119652800 Weak transcription NHEK skin
24 chr6:119646600-119654600 Genic enhancers K562 blood
25 chr6:119646800-119654800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr6:119647600-119652600 Enhancers Pancreatic Islets Pancreatic Islet
27 chr6:119647600-119652800 Weak transcription HUES6 Cell Line embryonic stem cell
28 chr6:119647600-119662200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr6:119647600-119664400 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr6:119647800-119655800 Weak transcription Fetal Lung lung
31 chr6:119647800-119655800 Weak transcription Monocytes-CD14+_RO01746 blood
32 chr6:119647800-119661400 Weak transcription Spleen Spleen
33 chr6:119648200-119652800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr6:119648200-119652800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
35 chr6:119648200-119657000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr6:119648200-119661400 Weak transcription Lung lung
37 chr6:119648200-119668000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr6:119648200-119668000 Weak transcription Esophagus oesophagus
39 chr6:119648600-119652800 Weak transcription GM12878-XiMat blood
40 chr6:119648600-119661000 Weak transcription Fetal Muscle Leg muscle
41 chr6:119649600-119659800 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr6:119650200-119652800 Weak transcription Fetal Adrenal Gland Adrenal Gland
43 chr6:119650400-119652800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
44 chr6:119650600-119655800 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr6:119651000-119656000 Weak transcription Colon Smooth Muscle Colon
46 chr6:119651000-119661600 Weak transcription Stomach Smooth Muscle stomach
47 chr6:119651000-119662400 Weak transcription Rectal Smooth Muscle rectum
48 chr6:119651000-119667400 Weak transcription Fetal Stomach stomach
49 chr6:119651200-119652800 Weak transcription Pancreas Pancrea
50 chr6:119651200-119662400 Weak transcription Placenta Placenta

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Last update: Aug 31, 2015