The 2.0 version of rSNPBase

Variant report

Variant rs28368979
Chromosome Location chr5:43424197-43424198
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:27 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:43419000-43432600 Weak transcription Colonic Mucosa Colon
2 chr5:43420600-43430200 Weak transcription Gastric stomach
3 chr5:43422000-43425000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr5:43422000-43425800 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr5:43422000-43432600 Weak transcription Pancreas Pancrea
6 chr5:43422400-43425800 Weak transcription HSMM muscle
7 chr5:43422600-43425600 Weak transcription Osteobl bone
8 chr5:43422600-43425800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr5:43422600-43425800 Weak transcription Muscle Satellite Cultured Cells --
10 chr5:43422800-43425400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr5:43422800-43425600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr5:43422800-43425600 Weak transcription A549 lung
13 chr5:43422800-43425800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr5:43422800-43425800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr5:43422800-43425800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr5:43422800-43425800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr5:43422800-43425800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr5:43422800-43428400 Weak transcription Duodenum Mucosa Duodenum
19 chr5:43422800-43432800 Weak transcription NH-A brain
20 chr5:43423000-43425400 Weak transcription HSMMtube muscle
21 chr5:43423000-43425600 Weak transcription Stomach Mucosa stomach
22 chr5:43423000-43425800 Weak transcription NHEK skin
23 chr5:43423000-43428200 Weak transcription Liver Liver
24 chr5:43423200-43425800 Weak transcription HMEC breast
25 chr5:43423400-43425400 Weak transcription Hela-S3 cervix
26 chr5:43423600-43425600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr5:43423600-43426200 Weak transcription HepG2 liver

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015