Variant report
| Variant | rs13165339 |
|---|---|
| Chromosome Location | chr5:43275151-43275152 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:43246600-43281400 | Weak transcription | Brain Hippocampus Middle | brain |
| 2 | chr5:43270200-43277400 | Weak transcription | Brain Angular Gyrus | brain |
| 3 | chr5:43271200-43280200 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 4 | chr5:43273600-43279000 | Enhancers | Fetal Heart | heart |
| 5 | chr5:43274200-43275800 | Enhancers | Right Ventricle | heart |
| 6 | chr5:43274400-43275600 | Weak transcription | Gastric | stomach |
| 7 | chr5:43274400-43287000 | Weak transcription | Left Ventricle | heart |
| 8 | chr5:43274600-43279200 | Weak transcription | Brain Substantia Nigra | brain |
| 9 | chr5:43274600-43285000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 10 | chr5:43274600-43286800 | Weak transcription | Esophagus | oesophagus |
| 11 | chr5:43274800-43275400 | Active TSS | Liver | Liver |
| 12 | chr5:43274800-43277200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 13 | chr5:43274800-43286400 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 14 | chr5:43274800-43286600 | Weak transcription | Stomach Mucosa | stomach |
| 15 | chr5:43275000-43275200 | Enhancers | K562 | blood |
| 16 | chr5:43275000-43276800 | Weak transcription | Brain Anterior Caudate | brain |
| 17 | chr5:43275000-43279200 | Weak transcription | Adipose Nuclei | Adipose |
| 18 | chr5:43275000-43279400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 19 | chr5:43275000-43286400 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 20 | chr5:43275000-43286400 | Weak transcription | GM12878-XiMat | blood |
| 21 | chr5:43275000-43286600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
