Variant report
| Variant | rs3797152 |
|---|---|
| Chromosome Location | chr5:43389866-43389867 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:43368800-43396400 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 2 | chr5:43370000-43396200 | Weak transcription | Primary B cells from cord blood | blood |
| 3 | chr5:43371800-43396800 | Weak transcription | Small Intestine | intestine |
| 4 | chr5:43372200-43396800 | Weak transcription | Gastric | stomach |
| 5 | chr5:43373200-43396400 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 6 | chr5:43374600-43396400 | Weak transcription | Adipose Nuclei | Adipose |
| 7 | chr5:43375000-43396800 | Weak transcription | Spleen | Spleen |
| 8 | chr5:43377200-43396800 | Weak transcription | Colonic Mucosa | Colon |
| 9 | chr5:43378600-43396200 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 10 | chr5:43378800-43396400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 11 | chr5:43379000-43396400 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 12 | chr5:43379200-43395800 | Weak transcription | Placenta | Placenta |
| 13 | chr5:43380400-43396400 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 14 | chr5:43382200-43396400 | Weak transcription | Primary hematopoietic stem cells | blood |
| 15 | chr5:43386000-43396800 | Weak transcription | Esophagus | oesophagus |
| 16 | chr5:43387600-43396400 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 17 | chr5:43387800-43396200 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 18 | chr5:43388000-43396200 | Weak transcription | Thymus | Thymus |
| 19 | chr5:43388000-43396400 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 20 | chr5:43388000-43396800 | Weak transcription | Lung | lung |
| 21 | chr5:43388400-43396400 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 22 | chr5:43388600-43395600 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 23 | chr5:43388600-43395600 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 24 | chr5:43388600-43396200 | Weak transcription | Primary B cells from peripheral blood | blood |
| 25 | chr5:43388600-43396200 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 26 | chr5:43388600-43396200 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 27 | chr5:43388600-43396400 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 28 | chr5:43389000-43396200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 29 | chr5:43389000-43396400 | Weak transcription | Duodenum Mucosa | Duodenum |
| 30 | chr5:43389200-43390000 | Weak transcription | Primary T cells from cord blood | blood |
| 31 | chr5:43389200-43396200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 32 | chr5:43389200-43396600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 33 | chr5:43389600-43390600 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 34 | chr5:43389600-43390800 | Enhancers | Primary T helper naive cells fromperipheralblood | blood |
| 35 | chr5:43389800-43390000 | Enhancers | Fetal Stomach | stomach |
| 36 | chr5:43389800-43390200 | Enhancers | Primary neutrophils fromperipheralblood | blood |
| 37 | chr5:43389800-43390200 | Enhancers | Primary T helper cells fromperipheralblood | blood |
| 38 | chr5:43389800-43390400 | Enhancers | Primary T helper naive cells from peripheral blood | blood |
| 39 | chr5:43389800-43390400 | Enhancers | Primary T helper cells PMA-I stimulated | -- |
| 40 | chr5:43389800-43390400 | Enhancers | Primary T regulatory cells fromperipheralblood | blood |
| 41 | chr5:43389800-43390400 | Enhancers | Stomach Mucosa | stomach |
| 42 | chr5:43389800-43390600 | Enhancers | Primary T helper memory cells from peripheral blood 2 | blood |
| 43 | chr5:43389800-43393200 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
