The 2.0 version of rSNPBase

Variant report

Variant rs71590642
Chromosome Location chr5:43375432-43375433
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:43367200-43386400 Weak transcription Pancreas Pancrea
2 chr5:43367400-43376600 Weak transcription Colonic Mucosa Colon
3 chr5:43367600-43376000 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr5:43368200-43376400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr5:43368400-43381600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr5:43368600-43376600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr5:43368600-43389800 Weak transcription Stomach Mucosa stomach
8 chr5:43368800-43396400 Weak transcription Primary hematopoietic stem cells short term culture blood
9 chr5:43369000-43376400 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr5:43369000-43387000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr5:43369200-43386800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr5:43370000-43396200 Weak transcription Primary B cells from cord blood blood
13 chr5:43370200-43376200 Weak transcription Primary T helper cells PMA-I stimulated --
14 chr5:43370200-43376400 Weak transcription Primary T cells from cord blood blood
15 chr5:43370400-43377200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr5:43370600-43376200 Weak transcription Duodenum Mucosa Duodenum
17 chr5:43371000-43379000 Weak transcription Primary T cells fromperipheralblood blood
18 chr5:43371800-43376200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr5:43371800-43376800 Weak transcription Primary B cells from peripheral blood blood
20 chr5:43371800-43396800 Weak transcription Small Intestine intestine
21 chr5:43372200-43376400 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr5:43372200-43376800 Weak transcription Primary hematopoietic stem cells blood
23 chr5:43372200-43396800 Weak transcription Gastric stomach
24 chr5:43372400-43375600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr5:43372400-43375800 Weak transcription Fetal Intestine Large intestine
26 chr5:43372400-43376200 Weak transcription Primary T helper cells fromperipheralblood blood
27 chr5:43372600-43376600 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr5:43372800-43382000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr5:43373200-43396400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
30 chr5:43374400-43376400 Weak transcription HMEC breast
31 chr5:43374400-43381600 Weak transcription Pancreatic Islets Pancreatic Islet
32 chr5:43374600-43396400 Weak transcription Adipose Nuclei Adipose
33 chr5:43374800-43376400 Weak transcription Primary T regulatory cells fromperipheralblood blood
34 chr5:43375000-43378200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
35 chr5:43375000-43387000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr5:43375000-43396800 Weak transcription Spleen Spleen
37 chr5:43375200-43376600 Weak transcription Rectal Mucosa Donor 31 rectum
38 chr5:43375200-43379600 Weak transcription Primary T helper naive cells from peripheral blood blood
39 chr5:43375200-43379600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
40 chr5:43375400-43377000 Weak transcription Primary T killer naive cells fromperipheralblood blood
41 chr5:43375400-43387200 Weak transcription Thymus Thymus

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Last update: Aug 31, 2015