The 2.0 version of rSNPBase

Variant report

Variant rs10044799
Chromosome Location chr5:43398069-43398070
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:18 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:43397000-43404000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr5:43397400-43402000 Weak transcription Gastric stomach
3 chr5:43397400-43402800 Weak transcription Stomach Mucosa stomach
4 chr5:43397400-43410200 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr5:43397600-43398200 Enhancers Primary B cells from cord blood blood
6 chr5:43397600-43398200 Enhancers Primary T helper cells PMA-I stimulated --
7 chr5:43397600-43398400 Enhancers Primary T helper naive cells from peripheral blood blood
8 chr5:43397600-43398400 Enhancers Primary T killer naive cells fromperipheralblood blood
9 chr5:43397600-43401200 Weak transcription Duodenum Mucosa Duodenum
10 chr5:43397600-43402000 Weak transcription Pancreas Pancrea
11 chr5:43397600-43402000 Weak transcription A549 lung
12 chr5:43397600-43409400 Weak transcription Colonic Mucosa Colon
13 chr5:43397800-43398200 Enhancers Primary T cells from cord blood blood
14 chr5:43397800-43398200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr5:43397800-43398600 Enhancers Primary T helper naive cells fromperipheralblood blood
16 chr5:43398000-43398200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr5:43398000-43409000 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr5:43398000-43409400 Weak transcription Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015