Variant report
| Variant | rs28502686 |
|---|---|
| Chromosome Location | chr5:43426851-43426852 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:43419000-43432600 | Weak transcription | Colonic Mucosa | Colon |
| 2 | chr5:43420600-43430200 | Weak transcription | Gastric | stomach |
| 3 | chr5:43422000-43432600 | Weak transcription | Pancreas | Pancrea |
| 4 | chr5:43422800-43428400 | Weak transcription | Duodenum Mucosa | Duodenum |
| 5 | chr5:43422800-43432800 | Weak transcription | NH-A | brain |
| 6 | chr5:43423000-43428200 | Weak transcription | Liver | Liver |
| 7 | chr5:43425400-43427400 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 8 | chr5:43425400-43427800 | Enhancers | Hela-S3 | cervix |
| 9 | chr5:43425600-43427800 | Enhancers | A549 | lung |
| 10 | chr5:43425600-43430400 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 11 | chr5:43425800-43430400 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 12 | chr5:43425800-43430400 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 13 | chr5:43425800-43430400 | Enhancers | HMEC | breast |
| 14 | chr5:43425800-43430400 | Enhancers | NHEK | skin |
| 15 | chr5:43426400-43427000 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 16 | chr5:43426400-43427800 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 17 | chr5:43426400-43429200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 18 | chr5:43426400-43443600 | Weak transcription | Esophagus | oesophagus |
| 19 | chr5:43426600-43427800 | Weak transcription | HSMM | muscle |
| 20 | chr5:43426600-43428000 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 21 | chr5:43426600-43428000 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 22 | chr5:43426600-43428200 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 23 | chr5:43426600-43428400 | Weak transcription | NHLF | lung |
| 24 | chr5:43426800-43427200 | Weak transcription | HepG2 | liver |
| 25 | chr5:43426800-43427800 | Weak transcription | Osteobl | bone |
| 26 | chr5:43426800-43428000 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 27 | chr5:43426800-43430200 | Weak transcription | Stomach Mucosa | stomach |
