The 2.0 version of rSNPBase

Variant report

Variant rs28408150
Chromosome Location chr3:138526594-138526595
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:138494800-138537000 Weak transcription HUVEC blood vessel
2 chr3:138501200-138534200 Weak transcription Dnd41 blood
3 chr3:138501600-138532800 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr3:138504000-138552000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr3:138506000-138542200 Weak transcription Muscle Satellite Cultured Cells --
6 chr3:138506000-138551800 Weak transcription Primary B cells from cord blood blood
7 chr3:138506400-138536800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr3:138506600-138537000 Weak transcription Primary hematopoietic stem cells blood
9 chr3:138506800-138527200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr3:138510600-138530600 Weak transcription Fetal Stomach stomach
11 chr3:138511000-138534400 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr3:138512000-138542800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr3:138512400-138536800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr3:138512600-138534000 Weak transcription Primary B cells from peripheral blood blood
15 chr3:138513400-138528600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
16 chr3:138513400-138536800 Weak transcription HUES6 Cell Line embryonic stem cell
17 chr3:138513400-138544400 Weak transcription Fetal Muscle Leg muscle
18 chr3:138513600-138526600 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr3:138513600-138533400 Weak transcription Primary T killer memory cells from peripheral blood blood
20 chr3:138513600-138534200 Weak transcription Primary T cells from cord blood blood
21 chr3:138513600-138536600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr3:138513800-138534000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr3:138513800-138534600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr3:138513800-138543000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr3:138513800-138543000 Weak transcription Placenta Placenta
26 chr3:138514000-138527200 Weak transcription Fetal Intestine Large intestine
27 chr3:138514000-138528800 Weak transcription Primary hematopoietic stem cells short term culture blood
28 chr3:138514400-138534400 Weak transcription Fetal Thymus thymus
29 chr3:138514400-138536600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
30 chr3:138514800-138542600 Weak transcription Hela-S3 cervix
31 chr3:138515000-138528600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr3:138515000-138533000 Weak transcription Primary T cells fromperipheralblood blood
33 chr3:138516800-138528600 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr3:138517800-138534000 Weak transcription Thymus Thymus
35 chr3:138519400-138536600 Weak transcription Left Ventricle heart
36 chr3:138519400-138536600 Weak transcription Psoas Muscle Psoas
37 chr3:138522400-138534400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr3:138522600-138528600 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr3:138522600-138530600 Weak transcription K562 blood
40 chr3:138522600-138536600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr3:138522600-138536800 Weak transcription Brain Anterior Caudate brain
42 chr3:138522600-138537000 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr3:138522800-138528600 Weak transcription GM12878-XiMat blood
44 chr3:138522800-138533000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
45 chr3:138522800-138537000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
46 chr3:138522800-138537000 Weak transcription Small Intestine intestine
47 chr3:138523000-138529800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr3:138523000-138542600 Weak transcription HMEC breast
49 chr3:138523000-138543000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr3:138523200-138528600 Weak transcription NHEK skin

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Last update: Aug 31, 2015