Variant report

Variant rs540198
Chromosome Location chr3:138500512-138500513
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:138393800-138515000 Weak transcription Aorta Aorta
2 chr3:138488000-138504600 Weak transcription Primary B cells from cord blood blood
3 chr3:138488000-138519200 Weak transcription Spleen Spleen
4 chr3:138488200-138503200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr3:138488400-138512200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr3:138489000-138511600 Weak transcription Primary B cells from peripheral blood blood
7 chr3:138489200-138519200 Weak transcription iPS-20b Cell Line embryonic stem cell
8 chr3:138492400-138515800 Weak transcription iPS-18 Cell Line embryonic stem cell
9 chr3:138494200-138505600 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr3:138494400-138511600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr3:138494400-138511600 Weak transcription HUES64 Cell Line embryonic stem cell
12 chr3:138494600-138504400 Weak transcription Primary monocytes fromperipheralblood blood
13 chr3:138494600-138510200 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr3:138494600-138510200 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr3:138494600-138510200 Weak transcription Stomach Smooth Muscle stomach
16 chr3:138494600-138511000 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr3:138494600-138512200 Weak transcription Esophagus oesophagus
18 chr3:138494600-138513000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr3:138494600-138513600 Weak transcription HSMM muscle
20 chr3:138494600-138515800 Weak transcription Ovary ovary
21 chr3:138494600-138518600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr3:138494600-138521200 Weak transcription Right Ventricle heart
23 chr3:138494800-138501200 Weak transcription Fetal Heart heart
24 chr3:138494800-138510200 Weak transcription Duodenum Mucosa Duodenum
25 chr3:138494800-138537000 Weak transcription HUVEC blood vessel
26 chr3:138495400-138505000 Weak transcription Primary hematopoietic stem cells short term culture blood
27 chr3:138495400-138506200 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr3:138495600-138505200 Weak transcription Osteobl bone
29 chr3:138495600-138505400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr3:138495600-138505600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr3:138495600-138505600 Weak transcription Adipose Nuclei Adipose
32 chr3:138495600-138505600 Weak transcription HMEC breast
33 chr3:138495600-138517600 Weak transcription HSMMtube muscle
34 chr3:138495800-138505800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr3:138496000-138505600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr3:138496200-138505600 Weak transcription Brain Substantia Nigra brain
37 chr3:138496200-138506800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr3:138496200-138513600 Weak transcription NHLF lung
39 chr3:138496200-138516200 Weak transcription Fetal Muscle Trunk muscle
40 chr3:138496200-138521400 Weak transcription Brain Anterior Caudate brain
41 chr3:138496200-138522400 Weak transcription Brain Cingulate Gyrus brain
42 chr3:138496400-138505200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr3:138496400-138505200 Weak transcription NHEK skin
44 chr3:138496400-138508000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr3:138496400-138511000 Weak transcription Fetal Muscle Leg muscle
46 chr3:138496400-138515600 Weak transcription Psoas Muscle Psoas
47 chr3:138496800-138505600 Weak transcription Cortex derived primary cultured neurospheres brain
48 chr3:138497400-138504600 Weak transcription Monocytes-CD14+_RO01746 blood
49 chr3:138497400-138508600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
50 chr3:138497400-138515800 Weak transcription Gastric stomach

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