The 2.0 version of rSNPBase

Variant report

Variant rs28422052
Chromosome Location chr8:59875833-59875834
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:59851400-59878600 Weak transcription Aorta Aorta
2 chr8:59852000-59883400 Weak transcription Primary T regulatory cells fromperipheralblood blood
3 chr8:59852600-59888600 Weak transcription Primary hematopoietic stem cells blood
4 chr8:59867200-59878600 Weak transcription Cortex derived primary cultured neurospheres brain
5 chr8:59868000-59880000 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr8:59868200-59881200 Weak transcription Primary T cells from cord blood blood
7 chr8:59869800-59876800 Weak transcription Gastric stomach
8 chr8:59870200-59886600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr8:59871400-59877200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
10 chr8:59871600-59878000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr8:59871600-59878000 Weak transcription HSMM muscle
12 chr8:59871800-59878600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr8:59871800-59878600 Weak transcription NHLF lung
14 chr8:59872400-59878600 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr8:59872400-59878600 Weak transcription Rectal Smooth Muscle rectum
16 chr8:59872400-59887600 Weak transcription Colon Smooth Muscle Colon
17 chr8:59872600-59878600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr8:59872600-59880200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
19 chr8:59872600-59882400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr8:59872800-59876200 Weak transcription Stomach Mucosa stomach
21 chr8:59872800-59876400 Weak transcription Stomach Smooth Muscle stomach
22 chr8:59872800-59877000 Weak transcription Small Intestine intestine
23 chr8:59872800-59878600 Weak transcription Fetal Stomach stomach
24 chr8:59872800-59880000 Weak transcription Pancreas Pancrea
25 chr8:59872800-59889200 Weak transcription Duodenum Mucosa Duodenum
26 chr8:59873000-59883000 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr8:59873600-59878000 Weak transcription Osteobl bone
28 chr8:59873600-59878400 Weak transcription Fetal Heart heart
29 chr8:59873600-59878600 Weak transcription iPS-15b Cell Line embryonic stem cell
30 chr8:59873600-59887600 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr8:59873600-59893200 Weak transcription Primary T helper naive cells from peripheral blood blood
32 chr8:59874000-59876600 Enhancers Primary T cells fromperipheralblood blood
33 chr8:59874000-59878600 Weak transcription NHDF-Ad bronchial
34 chr8:59874600-59876000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
35 chr8:59874800-59876400 Enhancers Primary Natural Killer cells fromperipheralblood blood
36 chr8:59874800-59887600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr8:59875000-59876000 Strong transcription Dnd41 blood
38 chr8:59875000-59876400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr8:59875200-59876000 Strong transcription Thymus Thymus
40 chr8:59875400-59876600 Strong transcription Fetal Thymus thymus
41 chr8:59875600-59877200 Strong transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015