The 2.0 version of rSNPBase

Variant report

Variant rs28439173
Chromosome Location chr8:118545789-118545790
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:118533600-118545800 Weak transcription Esophagus oesophagus
2 chr8:118533600-118546000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr8:118533600-118546000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr8:118533600-118546400 Weak transcription Gastric stomach
5 chr8:118533600-118546400 Weak transcription Pancreas Pancrea
6 chr8:118533600-118546400 Weak transcription Spleen Spleen
7 chr8:118533800-118545800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr8:118533800-118546400 Weak transcription Placenta Amnion Placenta Amnion
9 chr8:118533800-118553800 Weak transcription Stomach Mucosa stomach
10 chr8:118534200-118545800 Weak transcription Right Ventricle heart
11 chr8:118534200-118546000 Weak transcription HSMMtube muscle
12 chr8:118534200-118546000 Weak transcription NH-A brain
13 chr8:118534400-118545800 Weak transcription Skeletal Muscle Male skeletal muscle
14 chr8:118534400-118546000 Weak transcription Aorta Aorta
15 chr8:118534400-118546000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr8:118534400-118546000 Weak transcription Psoas Muscle Psoas
17 chr8:118534400-118546000 Weak transcription Rectal Smooth Muscle rectum
18 chr8:118534400-118546000 Weak transcription Small Intestine intestine
19 chr8:118534400-118546000 Weak transcription HMEC breast
20 chr8:118534400-118546200 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr8:118534400-118557600 Weak transcription Fetal Brain Male brain
22 chr8:118534600-118545800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr8:118534800-118546000 Weak transcription Fetal Heart heart
24 chr8:118534800-118546000 Weak transcription A549 lung
25 chr8:118534800-118546000 Weak transcription NHLF lung
26 chr8:118535200-118550400 Weak transcription K562 blood
27 chr8:118536200-118545800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr8:118536400-118545800 Weak transcription Fetal Stomach stomach
29 chr8:118537400-118546000 Weak transcription Brain Substantia Nigra brain
30 chr8:118538200-118546000 Weak transcription Primary T killer memory cells from peripheral blood blood
31 chr8:118540800-118546000 Strong transcription Monocytes-CD14+_RO01746 blood
32 chr8:118541000-118545800 Strong transcription Primary T helper cells fromperipheralblood blood
33 chr8:118541000-118546000 Strong transcription Primary monocytes fromperipheralblood blood
34 chr8:118541200-118545800 Weak transcription Muscle Satellite Cultured Cells --
35 chr8:118541200-118546400 Weak transcription Osteobl bone
36 chr8:118541400-118545800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
37 chr8:118541400-118546000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
38 chr8:118541400-118546000 Strong transcription Primary T regulatory cells fromperipheralblood blood
39 chr8:118541400-118546000 Strong transcription Fetal Thymus thymus
40 chr8:118541400-118546600 Strong transcription Rectal Mucosa Donor 31 rectum
41 chr8:118541600-118545800 Strong transcription Primary T helper naive cells fromperipheralblood blood
42 chr8:118541800-118545800 Weak transcription iPS-20b Cell Line embryonic stem cell
43 chr8:118541800-118546000 Strong transcription NHDF-Ad bronchial
44 chr8:118541800-118547400 Strong transcription Primary T cells fromperipheralblood blood
45 chr8:118542000-118545800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr8:118542000-118558600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
47 chr8:118542400-118546800 Strong transcription Skeletal Muscle Female skeletal muscle
48 chr8:118543000-118546000 Strong transcription Rectal Mucosa Donor 29 rectum
49 chr8:118543000-118546200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr8:118543600-118545800 Weak transcription Brain Hippocampus Middle brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015