Variant report

Variant	rs284759
Chromosome Location	chr5:35474284-35474285
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs11750298	0.85[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs11953352	0.86[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs13181071	0.86[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs1508658	0.85[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs284744	0.92[ASN][1000 genomes]
rs284751	0.93[ASN][1000 genomes]
rs284757	0.82[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs284758	0.85[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs284760	0.94[ASN][1000 genomes]
rs284762	0.86[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs284765	0.86[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs4461609	0.86[AMR][1000 genomes];0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018541	chr5:35446209-35491185	Enhancers Flanking Active TSS Weak transcription Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv1030395	chr5:35446516-35491185	Enhancers Active TSS Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:35469200-35479400	Weak transcription	Pancreas	Pancrea
2	chr5:35471000-35475000	Weak transcription	Monocytes-CD14+_RO01746	blood
3	chr5:35471200-35475800	Weak transcription	Primary neutrophils fromperipheralblood	blood
4	chr5:35471600-35476400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
5	chr5:35474000-35478000	Weak transcription	NHDF-Ad	bronchial

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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