Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:35475711..35478019-chr5:35478892..35481658,2	MCF-7	breast:
2	chr5:35478172..35480721-chr5:35482936..35485324,3	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs11750298	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11953352	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs13177312	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1508658	0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2036676	0.80[ASN][1000 genomes]
rs2397843	0.80[ASN][1000 genomes]
rs284744	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs284747	0.82[ASN][1000 genomes]
rs284749	0.82[ASN][1000 genomes]
rs284750	0.82[ASN][1000 genomes]
rs284751	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs284754	0.80[ASN][1000 genomes]
rs284755	0.80[ASN][1000 genomes]
rs284756	0.80[ASN][1000 genomes]
rs284757	0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs284758	0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs284759	0.86[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs284760	0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs284762	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs284764	0.80[ASN][1000 genomes]
rs284765	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs284766	0.80[ASN][1000 genomes]
rs4461609	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018541	chr5:35446209-35491185	Enhancers Flanking Active TSS Weak transcription Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv1030395	chr5:35446516-35491185	Enhancers Active TSS Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:35478400-35482400	Weak transcription	Ovary	ovary
2	chr5:35479600-35482000	Weak transcription	Primary neutrophils fromperipheralblood	blood
3	chr5:35479600-35482000	Weak transcription	Fetal Kidney	kidney
4	chr5:35479600-35482400	Weak transcription	Fetal Lung	lung
5	chr5:35479600-35483000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
6	chr5:35479800-35482200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr5:35479800-35482400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
8	chr5:35479800-35482800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr5:35479800-35483000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr5:35479800-35488600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr5:35480000-35480800	Enhancers	HepG2	liver
12	chr5:35480000-35482400	Weak transcription	Fetal Intestine Large	intestine
13	chr5:35480200-35482400	Weak transcription	Fetal Intestine Small	intestine
14	chr5:35480200-35483800	Weak transcription	Colon Smooth Muscle	Colon
15	chr5:35480400-35481600	Weak transcription	Primary monocytes fromperipheralblood	blood
16	chr5:35480400-35481600	Weak transcription	Monocytes-CD14+_RO01746	blood
17	chr5:35480400-35482400	Weak transcription	Liver	Liver
18	chr5:35480400-35483200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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