Variant report

Variant rs28496971
Chromosome Location chr4:166409234-166409235
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:166386400-166414400 Weak transcription Fetal Brain Male brain
2 chr4:166389800-166414600 Weak transcription Ovary ovary
3 chr4:166391600-166414400 Weak transcription Fetal Kidney kidney
4 chr4:166392200-166419600 Weak transcription Brain Angular Gyrus brain
5 chr4:166395600-166419400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr4:166396400-166425400 Weak transcription Fetal Muscle Trunk muscle
7 chr4:166397600-166427600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr4:166397600-166428200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr4:166398000-166409400 Weak transcription Brain Germinal Matrix brain
10 chr4:166398000-166427000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr4:166398200-166420000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr4:166399200-166424600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr4:166401200-166412800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr4:166403400-166412000 Strong transcription HepG2 liver
15 chr4:166403600-166424800 Weak transcription Skeletal Muscle Female skeletal muscle
16 chr4:166403800-166423200 Weak transcription Brain Inferior Temporal Lobe brain
17 chr4:166404000-166414800 Weak transcription Fetal Lung lung
18 chr4:166404200-166414000 Weak transcription Fetal Intestine Small intestine
19 chr4:166405800-166419800 Weak transcription Pancreas Pancrea
20 chr4:166406200-166424000 Weak transcription Left Ventricle heart
21 chr4:166406400-166414200 Weak transcription Fetal Intestine Large intestine
22 chr4:166406600-166410800 Strong transcription Fetal Brain Female brain
23 chr4:166407000-166409600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr4:166407200-166409800 Strong transcription Aorta Aorta
25 chr4:166407800-166410800 Strong transcription Fetal Adrenal Gland Adrenal Gland
26 chr4:166408200-166410000 Strong transcription Cortex derived primary cultured neurospheres brain
27 chr4:166408200-166410800 Strong transcription Pancreatic Islets Pancreatic Islet
28 chr4:166408400-166410800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr4:166408600-166409600 Strong transcription Breast Myoepithelial Primary Cells Breast
30 chr4:166408600-166409800 Strong transcription Brain Substantia Nigra brain
31 chr4:166408600-166410200 Strong transcription Brain Cingulate Gyrus brain
32 chr4:166408600-166410400 Strong transcription Brain Anterior Caudate brain
33 chr4:166408600-166413200 Weak transcription iPS-20b Cell Line embryonic stem cell
34 chr4:166408800-166409400 Strong transcription Fetal Stomach stomach
35 chr4:166408800-166414400 Weak transcription HUES48 Cell Line embryonic stem cell
36 chr4:166409200-166414400 Weak transcription Brain Hippocampus Middle brain

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