Variant report

Variant	rs11734444
Chromosome Location	chr4:166399047-166399048
allele	A/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:166396763..166399582-chr4:166403526..166406591,3	K562	blood:

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11728545	1.00[AFR][1000 genomes]
rs11734732	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11735345	1.00[AFR][1000 genomes]
rs11737095	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17502660	1.00[AFR][1000 genomes]
rs17587323	1.00[AFR][1000 genomes]
rs17631042	1.00[CEU][hapmap];1.00[AFR][1000 genomes]
rs17687429	0.86[CHB][hapmap];1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2276931	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2304592	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs28496971	0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3775313	0.86[CHB][hapmap];1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs3775315	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4690821	1.00[CEU][hapmap];0.86[CHB][hapmap];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72703674	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs72703678	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs72703686	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs72705403	0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs72705404	1.00[AFR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72705405	1.00[AFR][1000 genomes];0.84[EUR][1000 genomes]
rs72705408	1.00[AFR][1000 genomes]
rs72705412	1.00[AFR][1000 genomes]

No data

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:166386400-166414400	Weak transcription	Fetal Brain Male	brain
2	chr4:166389800-166414600	Weak transcription	Ovary	ovary
3	chr4:166390600-166407200	Weak transcription	Aorta	Aorta
4	chr4:166391600-166414400	Weak transcription	Fetal Kidney	kidney
5	chr4:166392200-166405600	Weak transcription	Pancreas	Pancrea
6	chr4:166392200-166419600	Weak transcription	Brain Angular Gyrus	brain
7	chr4:166393600-166408600	Weak transcription	Brain Anterior Caudate	brain
8	chr4:166394600-166408600	Weak transcription	Brain Cingulate Gyrus	brain
9	chr4:166395400-166408600	Weak transcription	Brain Hippocampus Middle	brain
10	chr4:166395600-166419400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr4:166396400-166399200	Enhancers	Hela-S3	cervix
12	chr4:166396400-166425400	Weak transcription	Fetal Muscle Trunk	muscle
13	chr4:166396800-166407000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
14	chr4:166397000-166408000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
15	chr4:166397200-166408800	Weak transcription	Fetal Stomach	stomach
16	chr4:166397400-166399400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr4:166397400-166403400	Weak transcription	Fetal Brain Female	brain
18	chr4:166397400-166408200	Weak transcription	Cortex derived primary cultured neurospheres	brain
19	chr4:166397600-166427600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
20	chr4:166397600-166428200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
21	chr4:166398000-166409400	Weak transcription	Brain Germinal Matrix	brain
22	chr4:166398000-166427000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
23	chr4:166398200-166399200	Enhancers	Pancreatic Islets	Pancreatic Islet
24	chr4:166398200-166403400	Weak transcription	HepG2	liver
25	chr4:166398200-166405600	Weak transcription	Esophagus	oesophagus
26	chr4:166398200-166407800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
27	chr4:166398200-166420000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
28	chr4:166398400-166399200	Enhancers	K562	blood
29	chr4:166398400-166402400	Weak transcription	NH-A	brain
30	chr4:166398600-166400800	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
31	chr4:166399000-166399200	ZNF genes & repeats	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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