Variant report

Variant	rs28517766
Chromosome Location	chr4:46950211-46950212
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10018276	1.00[ASN][1000 genomes]
rs10024134	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12499295	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12505121	0.95[ASN][1000 genomes]
rs12505347	1.00[ASN][1000 genomes]
rs12508647	1.00[ASN][1000 genomes]
rs12509947	0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1398175	0.95[ASN][1000 genomes]
rs1398176	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1512137	1.00[ASN][1000 genomes]
rs16851641	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16859613	0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs16859751	1.00[ASN][1000 genomes]
rs16859764	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1877397	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1877403	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28413841	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28684796	0.87[ASN][1000 genomes]
rs6815456	1.00[ASN][1000 genomes]
rs6856047	0.93[ASN][1000 genomes]
rs6858292	0.94[EUR][1000 genomes]
rs7666667	0.87[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs7676918	0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7685553	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7689605	1.00[ASN][1000 genomes]
rs7695616	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9291291	0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9291300	0.96[EUR][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:46946000-46950600	Enhancers	Fetal Heart	heart
2	chr4:46947400-46952200	Weak transcription	Right Ventricle	heart
3	chr4:46947600-46952200	Weak transcription	Left Ventricle	heart
4	chr4:46948000-46950400	Enhancers	Fetal Brain Male	brain
5	chr4:46948800-46955200	Weak transcription	Brain Cingulate Gyrus	brain
6	chr4:46949600-46955200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr4:46949800-46950600	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
8	chr4:46949800-46954400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr4:46949800-46958400	Weak transcription	Brain Anterior Caudate	brain

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