Variant report
| Variant | rs9291300 |
|---|---|
| Chromosome Location | chr4:46959282-46959283 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:40)
| rs_ID | r2[population] |
|---|---|
| rs10018276 | 0.82[CEU][hapmap] |
| rs10024134 | 1.00[CEU][hapmap];0.93[EUR][1000 genomes] |
| rs1116736 | 0.97[ASN][1000 genomes] |
| rs12499295 | 0.92[EUR][1000 genomes] |
| rs12505121 | 0.82[CEU][hapmap] |
| rs12505347 | 0.82[CEU][hapmap] |
| rs12508647 | 0.82[CEU][hapmap] |
| rs12509947 | 0.90[EUR][1000 genomes] |
| rs12512719 | 0.88[CHB][hapmap] |
| rs1398175 | 0.82[CEU][hapmap] |
| rs1398176 | 1.00[CEU][hapmap];0.96[EUR][1000 genomes] |
| rs1512127 | 1.00[CEU][hapmap] |
| rs1512128 | 1.00[CEU][hapmap] |
| rs1512137 | 0.82[CEU][hapmap] |
| rs16851641 | 1.00[CEU][hapmap];0.93[EUR][1000 genomes] |
| rs16859613 | 1.00[CEU][hapmap];0.90[EUR][1000 genomes] |
| rs16859669 | 0.82[CEU][hapmap] |
| rs16859764 | 0.93[EUR][1000 genomes] |
| rs17641147 | 0.82[CEU][hapmap] |
| rs1877397 | 1.00[CEU][hapmap];0.95[EUR][1000 genomes] |
| rs1877403 | 1.00[CEU][hapmap];0.92[EUR][1000 genomes] |
| rs2280075 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes] |
| rs2351168 | 0.82[CEU][hapmap] |
| rs28369021 | 0.97[ASN][1000 genomes] |
| rs28413841 | 0.89[EUR][1000 genomes] |
| rs28517766 | 0.96[EUR][1000 genomes] |
| rs3792208 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes] |
| rs4695182 | 0.89[CHB][hapmap] |
| rs6815456 | 0.82[CEU][hapmap] |
| rs6856763 | 0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes] |
| rs6858292 | 0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes] |
| rs7666145 | 0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes] |
| rs7666667 | 0.82[CEU][hapmap] |
| rs7676918 | 1.00[CEU][hapmap];0.90[EUR][1000 genomes] |
| rs7678824 | 1.00[CEU][hapmap] |
| rs7685553 | 1.00[CEU][hapmap];0.93[EUR][1000 genomes] |
| rs7689605 | 0.82[CEU][hapmap] |
| rs7690061 | 1.00[CEU][hapmap] |
| rs7695616 | 1.00[CEU][hapmap];0.93[EUR][1000 genomes] |
| rs9291291 | 0.86[EUR][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr4:46951400-46969400 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 2 | chr4:46959000-46977200 | Weak transcription | Brain Anterior Caudate | brain |
