Variant report

Variant	rs7666145
Chromosome Location	chr4:46957886-46957887
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10018276	1.00[CEU][hapmap];0.82[AFR][1000 genomes];0.97[EUR][1000 genomes]
rs10024134	0.82[CEU][hapmap]
rs1116736	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12505121	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs12505347	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs12508647	1.00[CEU][hapmap];0.85[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs12512719	0.88[CHB][hapmap]
rs1398175	1.00[CEU][hapmap];0.85[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs1398176	0.82[CEU][hapmap]
rs1512137	1.00[CEU][hapmap];0.85[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs16859613	0.82[CEU][hapmap]
rs16859669	1.00[CEU][hapmap]
rs16859751	1.00[CEU][hapmap];0.85[AFR][1000 genomes];0.98[EUR][1000 genomes]
rs17641147	1.00[CEU][hapmap]
rs1877397	0.82[CEU][hapmap]
rs1877399	0.90[EUR][1000 genomes]
rs1877403	0.82[CEU][hapmap]
rs2280075	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2351168	1.00[CEU][hapmap]
rs28369021	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs28684796	0.98[EUR][1000 genomes]
rs3792208	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4695182	0.89[CHB][hapmap]
rs6815456	1.00[CEU][hapmap];0.85[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs6856047	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs6856763	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6858292	0.95[ASN][1000 genomes]
rs7666667	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs7676918	0.82[CEU][hapmap]
rs7685553	0.82[CEU][hapmap]
rs7689605	1.00[CEU][hapmap];0.98[EUR][1000 genomes]
rs7690061	0.82[CEU][hapmap]
rs9291300	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:46949800-46958400	Weak transcription	Brain Anterior Caudate	brain
2	chr4:46951400-46969400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links