Variant report

Variant	rs3792208
Chromosome Location	chr4:46974038-46974039
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10018276	1.00[CEU][hapmap];0.91[EUR][1000 genomes]
rs1116736	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12505121	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs12505347	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs12508647	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs12512719	0.88[CHB][hapmap]
rs1398175	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs1512128	0.86[GIH][hapmap]
rs1512137	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs16851641	0.86[GIH][hapmap]
rs16859669	1.00[CEU][hapmap]
rs16859751	1.00[CEU][hapmap];1.00[GIH][hapmap];0.81[LWK][hapmap];0.92[EUR][1000 genomes]
rs17641147	1.00[CEU][hapmap]
rs1877399	0.90[EUR][1000 genomes]
rs2280075	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.90[MEX][hapmap];1.00[MKK][hapmap];0.86[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2351168	1.00[CEU][hapmap]
rs28369021	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28684796	0.92[EUR][1000 genomes]
rs3792210	0.82[ASN][1000 genomes]
rs4695182	0.89[CHB][hapmap]
rs6815456	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs6856047	1.00[CEU][hapmap];0.91[GIH][hapmap];0.81[LWK][hapmap];0.87[EUR][1000 genomes]
rs6856763	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6858292	1.00[ASN][1000 genomes]
rs7666145	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7666667	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs7678824	0.86[GIH][hapmap]
rs7689605	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs7695616	0.86[GIH][hapmap]
rs871208	0.83[ASN][1000 genomes]
rs9291300	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:46959000-46977200	Weak transcription	Brain Anterior Caudate	brain
2	chr4:46973200-46976400	Weak transcription	Brain Germinal Matrix	brain

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