The 2.0 version of rSNPBase

Variant report

Variant rs28533453
Chromosome Location chr16:47726275-47726276
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:47666200-47729800 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr16:47678200-47735000 Weak transcription Fetal Brain Male brain
3 chr16:47678400-47730800 Weak transcription NH-A brain
4 chr16:47678600-47733200 Weak transcription NHLF lung
5 chr16:47685600-47730600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
6 chr16:47688200-47727000 Weak transcription Primary T helper naive cells from peripheral blood blood
7 chr16:47688200-47727200 Weak transcription Hela-S3 cervix
8 chr16:47695800-47727200 Weak transcription Muscle Satellite Cultured Cells --
9 chr16:47695800-47735000 Weak transcription Placenta Amnion Placenta Amnion
10 chr16:47696000-47727800 Weak transcription Brain Cingulate Gyrus brain
11 chr16:47696000-47730200 Weak transcription NHEK skin
12 chr16:47696000-47737800 Weak transcription HMEC breast
13 chr16:47699000-47728600 Weak transcription HUVEC blood vessel
14 chr16:47699400-47735000 Weak transcription Pancreatic Islets Pancreatic Islet
15 chr16:47700800-47731400 Weak transcription Stomach Mucosa stomach
16 chr16:47711400-47730200 Weak transcription Brain Angular Gyrus brain
17 chr16:47711600-47726600 Weak transcription GM12878-XiMat blood
18 chr16:47711600-47727200 Weak transcription Aorta Aorta
19 chr16:47711600-47727200 Weak transcription Colonic Mucosa Colon
20 chr16:47711600-47727200 Weak transcription Gastric stomach
21 chr16:47711600-47727800 Weak transcription HUES48 Cell Line embryonic stem cell
22 chr16:47711600-47727800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr16:47711600-47727800 Weak transcription Brain Substantia Nigra brain
24 chr16:47711600-47727800 Weak transcription HSMMtube muscle
25 chr16:47711600-47728400 Weak transcription Psoas Muscle Psoas
26 chr16:47711600-47728400 Weak transcription Osteobl bone
27 chr16:47711600-47730400 Weak transcription Fetal Lung lung
28 chr16:47711600-47730400 Weak transcription Spleen Spleen
29 chr16:47711600-47730600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
30 chr16:47711600-47736600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr16:47711800-47727200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr16:47715600-47733200 Weak transcription iPS-18 Cell Line embryonic stem cell
33 chr16:47717800-47727200 Weak transcription Esophagus oesophagus
34 chr16:47717800-47746600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr16:47718200-47727200 Weak transcription Thymus Thymus
36 chr16:47718200-47730200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr16:47718400-47730200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
38 chr16:47718600-47727200 Weak transcription Fetal Muscle Leg muscle
39 chr16:47718600-47734600 Weak transcription H9 Cell Line embryonic stem cell
40 chr16:47719000-47733200 Weak transcription H1 Cell Line embryonic stem cell
41 chr16:47720400-47735000 Strong transcription Primary B cells from cord blood blood
42 chr16:47721200-47732200 Strong transcription Primary monocytes fromperipheralblood blood
43 chr16:47721200-47733200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr16:47721200-47736000 Strong transcription Monocytes-CD14+_RO01746 blood
45 chr16:47721600-47731800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr16:47721600-47732200 Strong transcription Left Ventricle heart
47 chr16:47721600-47732600 Strong transcription Breast Myoepithelial Primary Cells Breast
48 chr16:47721600-47733600 Strong transcription Liver Liver
49 chr16:47721600-47733800 Strong transcription Primary B cells from peripheral blood blood
50 chr16:47721600-47733800 Strong transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015