The 2.0 version of rSNPBase

Variant report

Variant rs28691569
Chromosome Location chr16:47627482-47627483
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:47581400-47641800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr16:47599800-47651200 Weak transcription A549 lung
3 chr16:47609000-47646600 Weak transcription NHLF lung
4 chr16:47609200-47628200 Weak transcription NH-A brain
5 chr16:47609600-47694400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr16:47618800-47628000 Weak transcription H9 Cell Line embryonic stem cell
7 chr16:47618800-47633000 Weak transcription iPS-20b Cell Line embryonic stem cell
8 chr16:47619000-47632800 Weak transcription H1 Cell Line embryonic stem cell
9 chr16:47619000-47633400 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr16:47619200-47633400 Weak transcription iPS-18 Cell Line embryonic stem cell
11 chr16:47620400-47653000 Weak transcription Primary T helper naive cells from peripheral blood blood
12 chr16:47620800-47629400 Strong transcription Primary monocytes fromperipheralblood blood
13 chr16:47621200-47651600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr16:47621600-47629600 Strong transcription Primary B cells from peripheral blood blood
15 chr16:47622000-47627600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr16:47622000-47628800 Strong transcription HepG2 liver
17 chr16:47622000-47634800 Strong transcription Monocytes-CD14+_RO01746 blood
18 chr16:47622600-47627600 Strong transcription Fetal Adrenal Gland Adrenal Gland
19 chr16:47622600-47628800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr16:47622600-47628800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
21 chr16:47622600-47629800 Strong transcription Primary B cells from cord blood blood
22 chr16:47623200-47627800 Weak transcription Pancreatic Islets Pancreatic Islet
23 chr16:47624200-47628000 Strong transcription Brain Substantia Nigra brain
24 chr16:47624800-47634800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr16:47625000-47642400 Weak transcription Fetal Brain Male brain
26 chr16:47625200-47628600 Strong transcription GM12878-XiMat blood
27 chr16:47625200-47629600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr16:47625200-47668400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
29 chr16:47625400-47636800 Weak transcription Fetal Heart heart
30 chr16:47625600-47642400 Weak transcription Right Ventricle heart
31 chr16:47625600-47645800 Weak transcription NHEK skin
32 chr16:47625800-47645800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
33 chr16:47625800-47645800 Weak transcription Psoas Muscle Psoas
34 chr16:47625800-47646400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr16:47625800-47651400 Weak transcription Brain Angular Gyrus brain
36 chr16:47626000-47630400 Weak transcription Cortex derived primary cultured neurospheres brain
37 chr16:47626000-47634800 Weak transcription Pancreas Pancrea
38 chr16:47626000-47644800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr16:47626200-47632200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr16:47626200-47636200 Weak transcription HUES64 Cell Line embryonic stem cell
41 chr16:47626200-47650400 Weak transcription Osteobl bone
42 chr16:47626200-47651400 Weak transcription HUES6 Cell Line embryonic stem cell
43 chr16:47626200-47676600 Weak transcription Primary T killer naive cells fromperipheralblood blood
44 chr16:47626200-47677600 Weak transcription Aorta Aorta
45 chr16:47626400-47628600 Weak transcription Placenta Amnion Placenta Amnion
46 chr16:47626400-47630600 Weak transcription HSMMtube muscle
47 chr16:47626400-47647800 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr16:47626400-47648200 Weak transcription Primary T killer memory cells from peripheral blood blood
49 chr16:47626400-47648600 Weak transcription Colonic Mucosa Colon
50 chr16:47626400-47649000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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Last update: Aug 31, 2015