Variant report

Variant	rs28573682
Chromosome Location	chr11:59494565-59494566
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs11229984	1.00[AMR][1000 genomes]
rs11230060	1.00[AMR][1000 genomes]
rs12272496	1.00[AMR][1000 genomes]
rs12275935	1.00[AMR][1000 genomes]
rs12276470	1.00[AMR][1000 genomes]
rs12283319	1.00[AMR][1000 genomes]
rs12288523	1.00[AMR][1000 genomes]
rs12291351	1.00[AMR][1000 genomes]
rs12292617	1.00[AMR][1000 genomes]
rs12293459	1.00[AMR][1000 genomes]
rs12295294	1.00[AMR][1000 genomes]
rs28571182	1.00[AMR][1000 genomes]
rs57137541	1.00[AMR][1000 genomes]
rs58485629	1.00[AMR][1000 genomes]
rs60434270	1.00[AMR][1000 genomes]
rs7129130	1.00[AMR][1000 genomes]
rs73484858	1.00[AMR][1000 genomes]
rs73486922	1.00[AMR][1000 genomes]
rs73488876	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2752406	chr11:59490424-59529524	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:59491800-59496400	Enhancers	Primary neutrophils fromperipheralblood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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