The 2.0 version of rSNPBase

Variant report

Variant rs28608552
Chromosome Location chr9:102015926-102015927
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:101993600-102018200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr9:101994800-102016000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr9:101995800-102016000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr9:101996000-102016000 Weak transcription Primary T cells fromperipheralblood blood
5 chr9:101997000-102016400 Weak transcription Brain Hippocampus Middle brain
6 chr9:102002200-102016200 Weak transcription Brain Angular Gyrus brain
7 chr9:102002400-102021400 Weak transcription Fetal Brain Female brain
8 chr9:102002400-102021600 Weak transcription Gastric stomach
9 chr9:102002600-102016200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr9:102002800-102021400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr9:102003200-102018000 Weak transcription Left Ventricle heart
12 chr9:102004000-102016000 Weak transcription Brain Inferior Temporal Lobe brain
13 chr9:102004200-102020000 Weak transcription Pancreas Pancrea
14 chr9:102006200-102016200 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr9:102006400-102017200 Weak transcription Brain Anterior Caudate brain
16 chr9:102006400-102021600 Weak transcription Aorta Aorta
17 chr9:102006600-102017600 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr9:102010400-102018400 Weak transcription Psoas Muscle Psoas
19 chr9:102013600-102016000 Enhancers Fetal Thymus thymus
20 chr9:102015400-102016200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr9:102015400-102016600 Enhancers Primary hematopoietic stem cells blood
22 chr9:102015600-102016000 Enhancers Duodenum Mucosa Duodenum
23 chr9:102015600-102016000 Enhancers HMEC breast
24 chr9:102015600-102016400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr9:102015600-102016600 Enhancers Primary hematopoietic stem cells short term culture blood
26 chr9:102015600-102016600 Enhancers Primary T helper 17 cells PMA-I stimulated --
27 chr9:102015600-102016600 Enhancers K562 blood
28 chr9:102015600-102016800 Enhancers Primary B cells from peripheral blood blood
29 chr9:102015600-102016800 Enhancers Primary T helper cells PMA-I stimulated --
30 chr9:102015600-102016800 Enhancers Dnd41 blood
31 chr9:102015600-102016800 Flanking Active TSS GM12878-XiMat blood
32 chr9:102015800-102016000 Active TSS Primary T regulatory cells fromperipheralblood blood
33 chr9:102015800-102016000 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
34 chr9:102015800-102016200 Enhancers Primary T helper naive cells fromperipheralblood blood
35 chr9:102015800-102016200 Enhancers Primary T killer memory cells from peripheral blood blood
36 chr9:102015800-102016200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr9:102015800-102016200 Enhancers HSMM muscle
38 chr9:102015800-102016400 Enhancers NHEK skin
39 chr9:102015800-102016600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
40 chr9:102015800-102016600 Enhancers Primary T helper naive cells from peripheral blood blood
41 chr9:102015800-102016600 Enhancers Brain Cingulate Gyrus brain
42 chr9:102015800-102016800 Enhancers Primary B cells from cord blood blood
43 chr9:102015800-102016800 Enhancers Primary Natural Killer cells fromperipheralblood blood
44 chr9:102015800-102016800 Flanking Active TSS Thymus Thymus
45 chr9:102015800-102017000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr9:102015800-102018400 Weak transcription Right Ventricle heart

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Last update: Aug 31, 2015