The 2.0 version of rSNPBase

Variant report

Variant rs55676416
Chromosome Location chr9:102001059-102001060
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:101985400-102004400 Weak transcription Placenta Amnion Placenta Amnion
2 chr9:101986200-102003000 Strong transcription Fetal Muscle Leg muscle
3 chr9:101987800-102007600 Weak transcription Small Intestine intestine
4 chr9:101988800-102005800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr9:101989200-102001600 Weak transcription Right Atrium heart
6 chr9:101989200-102001800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr9:101991000-102001600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr9:101991000-102015800 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr9:101991200-102002600 Weak transcription Colonic Mucosa Colon
10 chr9:101991200-102007400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr9:101991800-102001600 Weak transcription Gastric stomach
12 chr9:101991800-102004000 Weak transcription Spleen Spleen
13 chr9:101991800-102007800 Weak transcription Pancreatic Islets Pancreatic Islet
14 chr9:101992000-102003600 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr9:101993400-102007400 Weak transcription Fetal Lung lung
16 chr9:101993600-102015800 Weak transcription Brain Cingulate Gyrus brain
17 chr9:101993600-102018200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr9:101993800-102001200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr9:101993800-102008000 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr9:101994000-102005800 Weak transcription Hela-S3 cervix
21 chr9:101994200-102007000 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr9:101994400-102007600 Weak transcription Fetal Kidney kidney
23 chr9:101994600-102002000 Weak transcription NHLF lung
24 chr9:101994800-102016000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
25 chr9:101995000-102001400 Weak transcription NHDF-Ad bronchial
26 chr9:101995000-102003600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr9:101995000-102005400 Weak transcription Brain Substantia Nigra brain
28 chr9:101995400-102003400 Weak transcription HUVEC blood vessel
29 chr9:101995400-102003600 Weak transcription NHEK skin
30 chr9:101995600-102001600 Weak transcription Left Ventricle heart
31 chr9:101995600-102001600 Weak transcription Lung lung
32 chr9:101995600-102001600 Weak transcription HMEC breast
33 chr9:101995600-102004200 Weak transcription iPS-20b Cell Line embryonic stem cell
34 chr9:101995600-102015400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr9:101995800-102001200 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr9:101995800-102001200 Weak transcription Primary T helper naive cells fromperipheralblood blood
37 chr9:101995800-102001400 Weak transcription HSMM muscle
38 chr9:101995800-102001400 Weak transcription NH-A brain
39 chr9:101995800-102001400 Weak transcription Osteobl bone
40 chr9:101995800-102001600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr9:101995800-102001600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr9:101995800-102001600 Weak transcription Duodenum Mucosa Duodenum
43 chr9:101995800-102002600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr9:101995800-102002600 Weak transcription Rectal Mucosa Donor 29 rectum
45 chr9:101995800-102002800 Weak transcription Esophagus oesophagus
46 chr9:101995800-102003400 Weak transcription Fetal Intestine Large intestine
47 chr9:101995800-102006200 Weak transcription Primary neutrophils fromperipheralblood blood
48 chr9:101995800-102007400 Weak transcription Ovary ovary
49 chr9:101995800-102015800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr9:101995800-102016000 Weak transcription Primary mononuclear cells fromperipheralblood Blood

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Last update: Aug 31, 2015