The 2.0 version of rSNPBase

Variant report

Variant rs58644416
Chromosome Location chr9:102008724-102008725
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:101991000-102015800 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr9:101993600-102015800 Weak transcription Brain Cingulate Gyrus brain
3 chr9:101993600-102018200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr9:101994800-102016000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr9:101995600-102015400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr9:101995800-102015800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr9:101995800-102016000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr9:101996000-102016000 Weak transcription Primary T cells fromperipheralblood blood
9 chr9:101997000-102016400 Weak transcription Brain Hippocampus Middle brain
10 chr9:101997400-102010200 Weak transcription Psoas Muscle Psoas
11 chr9:102001800-102015600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
12 chr9:102001800-102015800 Weak transcription Primary T helper naive cells fromperipheralblood blood
13 chr9:102002200-102009200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr9:102002200-102015400 Weak transcription Right Ventricle heart
15 chr9:102002200-102016200 Weak transcription Brain Angular Gyrus brain
16 chr9:102002400-102021400 Weak transcription Fetal Brain Female brain
17 chr9:102002400-102021600 Weak transcription Gastric stomach
18 chr9:102002600-102016200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr9:102002800-102021400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr9:102003000-102009600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr9:102003000-102009600 Weak transcription Adipose Nuclei Adipose
22 chr9:102003000-102009800 Weak transcription Lung lung
23 chr9:102003000-102011800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr9:102003200-102009800 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr9:102003200-102015600 Weak transcription Duodenum Mucosa Duodenum
26 chr9:102003200-102018000 Weak transcription Left Ventricle heart
27 chr9:102004000-102009400 Weak transcription HSMMtube muscle
28 chr9:102004000-102011800 Weak transcription Fetal Thymus thymus
29 chr9:102004000-102012000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr9:102004000-102015800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
31 chr9:102004000-102016000 Weak transcription Brain Inferior Temporal Lobe brain
32 chr9:102004200-102014400 Weak transcription Thymus Thymus
33 chr9:102004200-102020000 Weak transcription Pancreas Pancrea
34 chr9:102006000-102015800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr9:102006200-102008800 Weak transcription Liver Liver
36 chr9:102006200-102011800 Weak transcription HSMM muscle
37 chr9:102006200-102016200 Weak transcription Skeletal Muscle Female skeletal muscle
38 chr9:102006400-102017200 Weak transcription Brain Anterior Caudate brain
39 chr9:102006400-102021600 Weak transcription Aorta Aorta
40 chr9:102006600-102017600 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr9:102007800-102015600 Weak transcription Primary hematopoietic stem cells short term culture blood
42 chr9:102008200-102009000 Enhancers GM12878-XiMat blood

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Last update: Aug 31, 2015