Variant report

Variant	rs28655624
Chromosome Location	chr14:71146159-71146160
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs11625206	1.00[ASN][1000 genomes]
rs13379090	0.86[EUR][1000 genomes]
rs2233135	1.00[ASN][1000 genomes]
rs3088143	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs45560640	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61977961	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61988421	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61988422	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61988423	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72719792	1.00[ASN][1000 genomes]
rs72721903	1.00[ASN][1000 genomes]
rs9323544	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs953872	1.00[ASN][1000 genomes]

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:71133200-71150600	Weak transcription	Pancreas	Pancrea
2	chr14:71133200-71151000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
3	chr14:71133200-71173000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr14:71134600-71158600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr14:71138400-71146200	Weak transcription	Spleen	Spleen
6	chr14:71138600-71146400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr14:71139000-71151000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
8	chr14:71139000-71152200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr14:71139200-71151800	Weak transcription	H9 Cell Line	embryonic stem cell
10	chr14:71139200-71152200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
11	chr14:71140000-71151400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
12	chr14:71140200-71152600	Weak transcription	Brain Germinal Matrix	brain
13	chr14:71140400-71151800	Weak transcription	Primary T cells fromperipheralblood	blood
14	chr14:71140600-71151400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
15	chr14:71140600-71152200	Weak transcription	HUES48 Cell Line	embryonic stem cell
16	chr14:71140800-71146800	Weak transcription	GM12878-XiMat	blood
17	chr14:71141000-71146200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
18	chr14:71141000-71160800	Weak transcription	Primary T cells from cord blood	blood
19	chr14:71141400-71152000	Weak transcription	Cortex derived primary cultured neurospheres	brain
20	chr14:71142800-71149200	Weak transcription	Primary B cells from peripheral blood	blood
21	chr14:71142800-71153600	Weak transcription	Primary T helper cells fromperipheralblood	blood
22	chr14:71143000-71152000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
23	chr14:71143000-71152200	Weak transcription	H1 Cell Line	embryonic stem cell
24	chr14:71143000-71177800	Weak transcription	Primary B cells from cord blood	blood
25	chr14:71143200-71152600	Weak transcription	Fetal Brain Female	brain
26	chr14:71143400-71152200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
27	chr14:71144000-71146200	Weak transcription	HUES64 Cell Line	embryonic stem cell
28	chr14:71144400-71152000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
29	chr14:71144600-71152000	Weak transcription	HSMMtube	muscle

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