Variant report

Variant	rs28675160
Chromosome Location	chr8:130648915-130648916
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10093490	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10098018	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61545604	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6980681	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73402137	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7830537	0.81[AFR][1000 genomes]
rs7840974	0.81[AFR][1000 genomes]
rs7842916	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv612230	chr8:130624121-130661901	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Genic enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130636800-130651600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr8:130640200-130651600	Weak transcription	Fetal Muscle Leg	muscle
3	chr8:130647200-130649200	Enhancers	HUVEC	blood vessel
4	chr8:130647400-130649000	Enhancers	Primary hematopoietic stem cells short term culture	blood
5	chr8:130647800-130649000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr8:130648600-130649800	Weak transcription	K562	blood
7	chr8:130648600-130650200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
8	chr8:130648800-130650000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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