Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10257896	1.00[EUR][1000 genomes]
rs12113787	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13437712	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28550223	1.00[EUR][1000 genomes]
rs28849482	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28860808	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs327743	1.00[EUR][1000 genomes]
rs327746	1.00[EUR][1000 genomes]
rs56892113	1.00[EUR][1000 genomes]
rs57201575	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57286900	1.00[EUR][1000 genomes]
rs58229927	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59159299	1.00[EUR][1000 genomes]
rs59321991	1.00[EUR][1000 genomes]
rs59514699	1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs61158415	1.00[EUR][1000 genomes]
rs61496920	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73378498	1.00[EUR][1000 genomes]
rs73380403	1.00[EUR][1000 genomes]
rs73380408	1.00[EUR][1000 genomes]
rs73380410	1.00[EUR][1000 genomes]
rs9656505	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1029034	chr7:80838012-81137146	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv888560	chr7:80994529-81043804	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS ZNF genes & repeats	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:81033600-81034200	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr7:81033600-81034600	ZNF genes & repeats	H1 Cell Line	embryonic stem cell

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