Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:117950683..117953153-chr10:117956990..117959643,2	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10430632	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10749203	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10787637	0.81[ASN][1000 genomes]
rs1079261	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10885876	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10885877	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10885878	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11197582	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11197585	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3781551	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4259753	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4269847	0.81[ASN][1000 genomes]
rs4356140	0.80[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4384313	0.80[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4550150	0.87[ASN][1000 genomes]
rs4611119	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7090693	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7096877	0.80[ASN][1000 genomes]
rs7096912	0.80[ASN][1000 genomes]
rs881042	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9731211	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9804260	0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv428568	chr10:117806874-117972993	Flanking Active TSS Enhancers ZNF genes & repeats Weak transcription Active TSS Genic enhancers Strong transcription Bivalent Enhancer Bivalent/Poised TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	esv3449389	chr10:117806874-118102404	Active TSS Enhancers Bivalent Enhancer Strong transcription Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv832000	chr10:117944492-118116253	Enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117955400-117966800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr10:117956000-117962800	Weak transcription	Fetal Stomach	stomach
3	chr10:117956800-117967200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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