Variant report

Variant rs2909091
Chromosome Location chr19:38188471-38188472
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:38183200-38208800 Weak transcription Fetal Heart heart
2 chr19:38183400-38188800 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr19:38183400-38190000 Weak transcription Stomach Mucosa stomach
4 chr19:38183600-38188800 Weak transcription Fetal Kidney kidney
5 chr19:38183600-38189400 Weak transcription Psoas Muscle Psoas
6 chr19:38183600-38190000 Weak transcription Small Intestine intestine
7 chr19:38184200-38188600 Weak transcription Fetal Brain Male brain
8 chr19:38184200-38201200 Weak transcription Colonic Mucosa Colon
9 chr19:38184400-38208800 Weak transcription HepG2 liver
10 chr19:38186400-38191200 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
11 chr19:38186800-38189200 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr19:38186800-38189800 Strong transcription Fetal Stomach stomach
13 chr19:38186800-38191200 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr19:38187000-38207800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr19:38187000-38208000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr19:38187200-38190800 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr19:38187200-38191600 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr19:38187400-38188600 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
19 chr19:38187400-38188600 Strong transcription Brain Substantia Nigra brain
20 chr19:38187400-38189000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr19:38187400-38189200 ZNF genes & repeats Skeletal Muscle Female skeletal muscle
22 chr19:38187400-38189800 Strong transcription Cortex derived primary cultured neurospheres brain
23 chr19:38187400-38190400 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
24 chr19:38187400-38190600 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
25 chr19:38187400-38190600 Strong transcription Brain Inferior Temporal Lobe brain
26 chr19:38187400-38190600 Strong transcription Fetal Brain Female brain
27 chr19:38187400-38190800 ZNF genes & repeats Adipose Nuclei Adipose
28 chr19:38187400-38190800 Strong transcription Brain Angular Gyrus brain
29 chr19:38187400-38190800 Strong transcription Brain Germinal Matrix brain
30 chr19:38187400-38190800 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr19:38187400-38190800 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
32 chr19:38187400-38190800 Strong transcription Placenta Amnion Placenta Amnion
33 chr19:38187400-38190800 ZNF genes & repeats HSMM muscle
34 chr19:38187400-38190800 ZNF genes & repeats NHLF lung
35 chr19:38187400-38191000 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
36 chr19:38187400-38191000 Strong transcription Brain Anterior Caudate brain
37 chr19:38187400-38191000 Strong transcription Stomach Smooth Muscle stomach
38 chr19:38187400-38191200 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr19:38187400-38191400 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chr19:38187400-38191400 ZNF genes & repeats Primary hematopoietic stem cells blood
41 chr19:38187400-38191400 ZNF genes & repeats Muscle Satellite Cultured Cells --
42 chr19:38187400-38191400 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
43 chr19:38187400-38191600 ZNF genes & repeats Liver Liver
44 chr19:38187400-38191600 ZNF genes & repeats Duodenum Mucosa Duodenum
45 chr19:38187400-38191800 Strong transcription Fetal Lung lung
46 chr19:38187400-38192600 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
47 chr19:38187400-38192600 Strong transcription Left Ventricle heart
48 chr19:38187400-38192800 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
49 chr19:38187400-38192800 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr19:38187400-38199000 ZNF genes & repeats A549 lung

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