Variant report

Variant rs2972435
Chromosome Location chr19:38203810-38203811
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:38183200-38208800 Weak transcription Fetal Heart heart
2 chr19:38184400-38208800 Weak transcription HepG2 liver
3 chr19:38187000-38207800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr19:38187000-38208000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr19:38187400-38205800 Strong transcription Dnd41 blood
6 chr19:38187400-38208000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr19:38188200-38209200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr19:38189400-38209200 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr19:38190000-38206600 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr19:38190600-38209000 Weak transcription Brain Substantia Nigra brain
11 chr19:38190600-38209200 Weak transcription HSMMtube muscle
12 chr19:38190800-38209000 Weak transcription Stomach Mucosa stomach
13 chr19:38190800-38209200 Weak transcription Fetal Thymus thymus
14 chr19:38190800-38209200 Weak transcription Psoas Muscle Psoas
15 chr19:38191200-38209200 Weak transcription H9 Cell Line embryonic stem cell
16 chr19:38191200-38209200 Weak transcription Colon Smooth Muscle Colon
17 chr19:38193800-38209000 Weak transcription Hela-S3 cervix
18 chr19:38194600-38206600 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr19:38195200-38204400 Strong transcription Breast Myoepithelial Primary Cells Breast
20 chr19:38196000-38204200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr19:38196200-38204400 ZNF genes & repeats Primary hematopoietic stem cells blood
22 chr19:38197600-38208800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
23 chr19:38198600-38204400 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
24 chr19:38198800-38208800 Weak transcription Fetal Brain Male brain
25 chr19:38198800-38209000 Weak transcription Spleen Spleen
26 chr19:38198800-38209200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr19:38198800-38209200 Weak transcription Gastric stomach
28 chr19:38198800-38209400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr19:38198800-38209800 Weak transcription Esophagus oesophagus
30 chr19:38199000-38209000 Weak transcription Fetal Kidney kidney
31 chr19:38199000-38209000 Weak transcription Rectal Smooth Muscle rectum
32 chr19:38199000-38209200 Weak transcription Pancreas Pancrea
33 chr19:38199000-38209200 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr19:38199000-38209400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr19:38199000-38209400 Weak transcription HSMM muscle
36 chr19:38199600-38209000 Weak transcription Small Intestine intestine
37 chr19:38199800-38205200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr19:38200400-38209000 Weak transcription H1 Cell Line embryonic stem cell
39 chr19:38200400-38209000 Weak transcription Brain Anterior Caudate brain
40 chr19:38200400-38209200 Weak transcription Primary T helper naive cells from peripheral blood blood
41 chr19:38200400-38209200 Weak transcription NHDF-Ad bronchial
42 chr19:38200400-38209400 Weak transcription Placenta Amnion Placenta Amnion
43 chr19:38200600-38209400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
44 chr19:38200800-38206600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr19:38200800-38208800 Weak transcription Fetal Brain Female brain
46 chr19:38200800-38209000 Weak transcription Rectal Mucosa Donor 29 rectum
47 chr19:38200800-38209200 Weak transcription Brain Hippocampus Middle brain
48 chr19:38200800-38209200 Weak transcription Skeletal Muscle Male skeletal muscle
49 chr19:38201200-38209200 Weak transcription Thymus Thymus
50 chr19:38201400-38208800 Weak transcription Brain Germinal Matrix brain

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