The 2.0 version of rSNPBase

Variant report

Variant rs2994954
Chromosome Location chr1:85027785-85027786
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:84975800-85030200 Weak transcription Fetal Intestine Small intestine
2 chr1:84991000-85034200 Weak transcription Esophagus oesophagus
3 chr1:84991000-85038200 Weak transcription Thymus Thymus
4 chr1:84992400-85038800 Weak transcription Skeletal Muscle Female skeletal muscle
5 chr1:84995000-85028600 Weak transcription Fetal Intestine Large intestine
6 chr1:84998600-85038800 Weak transcription Right Ventricle heart
7 chr1:85001400-85036400 Weak transcription NH-A brain
8 chr1:85001600-85033600 Weak transcription NHLF lung
9 chr1:85001800-85028600 Weak transcription Fetal Thymus thymus
10 chr1:85002000-85038400 Weak transcription Aorta Aorta
11 chr1:85002200-85034200 Weak transcription Lung lung
12 chr1:85003000-85027800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
13 chr1:85003800-85033600 Weak transcription Left Ventricle heart
14 chr1:85004000-85036400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr1:85005200-85035000 Weak transcription Pancreas Pancrea
16 chr1:85006200-85027800 Weak transcription Primary T helper naive cells fromperipheralblood blood
17 chr1:85006200-85034600 Weak transcription Ovary ovary
18 chr1:85006200-85034800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr1:85006400-85034400 Weak transcription Colon Smooth Muscle Colon
20 chr1:85006600-85038600 Weak transcription Stomach Smooth Muscle stomach
21 chr1:85007200-85038600 Weak transcription Rectal Smooth Muscle rectum
22 chr1:85007400-85027800 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr1:85008800-85039000 Weak transcription Fetal Brain Male brain
24 chr1:85009400-85037000 Weak transcription HUVEC blood vessel
25 chr1:85014800-85039600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr1:85016600-85036400 Strong transcription Monocytes-CD14+_RO01746 blood
27 chr1:85017400-85036400 Weak transcription Primary T killer naive cells fromperipheralblood blood
28 chr1:85017400-85039600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr1:85019200-85027800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr1:85019200-85038400 Weak transcription Skeletal Muscle Male skeletal muscle
31 chr1:85019400-85032200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr1:85019600-85027800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr1:85019800-85030200 Weak transcription NHEK skin
34 chr1:85020000-85027800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
35 chr1:85020400-85027800 Weak transcription Brain Hippocampus Middle brain
36 chr1:85020600-85028800 Strong transcription Primary T cells from cord blood blood
37 chr1:85022000-85038800 Weak transcription Placenta Amnion Placenta Amnion
38 chr1:85022400-85034400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr1:85023400-85031400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr1:85023400-85034600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr1:85023400-85036400 Strong transcription Liver Liver
42 chr1:85023600-85034200 Weak transcription Fetal Muscle Leg muscle
43 chr1:85024000-85035000 Weak transcription Fetal Muscle Trunk muscle
44 chr1:85024000-85036200 Strong transcription Primary neutrophils fromperipheralblood blood
45 chr1:85024200-85033400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
46 chr1:85024600-85027800 Weak transcription HMEC breast
47 chr1:85024600-85028800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr1:85024600-85032000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr1:85024600-85036400 Strong transcription Primary monocytes fromperipheralblood blood
50 chr1:85024800-85029400 Strong transcription Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015