Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:103254361..103256762-chr7:103277435..103279324,2	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10229702	1.00[EUR][1000 genomes]
rs10234931	1.00[EUR][1000 genomes]
rs10235072	1.00[EUR][1000 genomes]
rs10242211	1.00[EUR][1000 genomes]
rs10257295	1.00[EUR][1000 genomes]
rs10261812	0.82[EUR][1000 genomes]
rs10265623	1.00[EUR][1000 genomes]
rs10480649	1.00[EUR][1000 genomes]
rs11971478	1.00[YRI][hapmap]
rs11971486	0.89[AFR][1000 genomes]
rs11973718	1.00[YRI][hapmap]
rs11973791	1.00[YRI][hapmap]
rs11974290	1.00[EUR][1000 genomes]
rs11976904	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11984057	1.00[YRI][hapmap]
rs362663	0.89[AFR][1000 genomes]
rs362679	0.89[AFR][1000 genomes]
rs362701	0.89[AFR][1000 genomes]
rs56255035	1.00[EUR][1000 genomes]
rs6977938	1.00[EUR][1000 genomes]
rs73410852	1.00[EUR][1000 genomes]
rs73410854	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv491911	chr7:102967150-103403622	Flanking Bivalent TSS/Enh Enhancers Weak transcription Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
2	nsv831085	chr7:103140672-103342388	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv427799	chr7:103250733-103454202	Enhancers Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	esv1835816	chr7:103255144-103354223	Enhancers Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
5	nsv516122	chr7:103274567-103291825	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:103273000-103283600	Weak transcription	K562	blood
2	chr7:103276600-103278800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr7:103276600-103279200	Enhancers	HMEC	breast
4	chr7:103276800-103279000	Enhancers	NH-A	brain
5	chr7:103276800-103279000	Enhancers	NHLF	lung
6	chr7:103276800-103279200	Enhancers	Osteobl	bone
7	chr7:103277000-103278800	Enhancers	NHEK	skin
8	chr7:103277000-103279000	Enhancers	Hela-S3	cervix
9	chr7:103277000-103279000	Enhancers	HUVEC	blood vessel
10	chr7:103277000-103281200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
11	chr7:103277000-103281200	Enhancers	NHDF-Ad	bronchial
12	chr7:103277000-103289200	Weak transcription	HepG2	liver
13	chr7:103277200-103278600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr7:103277400-103278000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
15	chr7:103277400-103278400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr7:103277400-103278800	Enhancers	HSMM	muscle
17	chr7:103277600-103279600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
18	chr7:103277600-103281400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
19	chr7:103277800-103278200	Flanking Active TSS	Muscle Satellite Cultured Cells	--

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