Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs160054	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs303175	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs303176	0.83[AMR][1000 genomes]
rs303177	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs303178	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs303179	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs303181	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs303183	0.88[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs303184	0.97[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs303188	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs303189	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs303191	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs303192	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs303195	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs303196	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs303197	0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs303199	0.84[EUR][1000 genomes]
rs303202	0.84[EUR][1000 genomes]
rs303204	0.83[EUR][1000 genomes]
rs304416	0.84[EUR][1000 genomes]
rs304429	0.84[EUR][1000 genomes]
rs304430	0.85[EUR][1000 genomes]
rs497191	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.80[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1042848	chr10:90466032-91318474	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
2	nsv540741	chr10:90466032-91318474	Enhancers Flanking Active TSS Weak transcription Genic enhancers Bivalent Enhancer ZNF genes & repeats Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
3	nsv1041964	chr10:90861380-91378356	Flanking Active TSS Enhancers Weak transcription Genic enhancers Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	82 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:91239000-91261800	Weak transcription	Pancreas	Pancrea
2	chr10:91251200-91274000	Weak transcription	Left Ventricle	heart
3	chr10:91259200-91263200	Weak transcription	Fetal Thymus	thymus
4	chr10:91259200-91268600	Weak transcription	Gastric	stomach
5	chr10:91259400-91261400	Weak transcription	Fetal Heart	heart

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