The 2.0 version of rSNPBase

Variant report

Variant rs3109950
Chromosome Location chr4:107270561-107270562
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:107243400-107271400 Weak transcription Right Ventricle heart
2 chr4:107247000-107271400 Strong transcription Primary B cells from peripheral blood blood
3 chr4:107258600-107281400 Weak transcription Fetal Heart heart
4 chr4:107259600-107270600 Weak transcription Brain Substantia Nigra brain
5 chr4:107259800-107272400 Weak transcription Colon Smooth Muscle Colon
6 chr4:107260000-107272200 Weak transcription iPS-18 Cell Line embryonic stem cell
7 chr4:107260200-107270600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr4:107260200-107271800 Weak transcription Lung lung
9 chr4:107260200-107272600 Weak transcription Fetal Intestine Small intestine
10 chr4:107260200-107274400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr4:107260200-107274400 Weak transcription Brain Inferior Temporal Lobe brain
12 chr4:107260200-107275800 Weak transcription Spleen Spleen
13 chr4:107260200-107276000 Weak transcription Rectal Smooth Muscle rectum
14 chr4:107260200-107276600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr4:107260200-107276800 Weak transcription Psoas Muscle Psoas
16 chr4:107260400-107274400 Weak transcription Brain Germinal Matrix brain
17 chr4:107260400-107276000 Weak transcription Brain Angular Gyrus brain
18 chr4:107260400-107276600 Weak transcription H1 Cell Line embryonic stem cell
19 chr4:107260800-107271800 Weak transcription HUES6 Cell Line embryonic stem cell
20 chr4:107260800-107272000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr4:107260800-107272000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr4:107260800-107273600 Weak transcription Thymus Thymus
23 chr4:107260800-107274000 Weak transcription Aorta Aorta
24 chr4:107260800-107274200 Weak transcription Placenta Amnion Placenta Amnion
25 chr4:107260800-107276000 Weak transcription Esophagus oesophagus
26 chr4:107260800-107276000 Weak transcription Fetal Stomach stomach
27 chr4:107260800-107276600 Weak transcription Pancreas Pancrea
28 chr4:107260800-107285400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr4:107261800-107270600 Weak transcription Stomach Smooth Muscle stomach
30 chr4:107261800-107272800 Weak transcription Brain Hippocampus Middle brain
31 chr4:107261800-107276600 Weak transcription Ovary ovary
32 chr4:107262000-107271800 Weak transcription Fetal Brain Female brain
33 chr4:107262000-107274200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr4:107262200-107276600 Weak transcription Brain Anterior Caudate brain
35 chr4:107262400-107270800 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr4:107262400-107271400 Weak transcription Cortex derived primary cultured neurospheres brain
37 chr4:107262800-107270800 Strong transcription Primary monocytes fromperipheralblood blood
38 chr4:107263000-107272000 Weak transcription Primary hematopoietic stem cells blood
39 chr4:107263400-107273000 Strong transcription Monocytes-CD14+_RO01746 blood
40 chr4:107264400-107272800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
41 chr4:107264400-107274000 Weak transcription Left Ventricle heart
42 chr4:107264600-107271200 Strong transcription Primary T helper cells fromperipheralblood blood
43 chr4:107264600-107271400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
44 chr4:107265000-107273000 Strong transcription Primary T cells from cord blood blood
45 chr4:107265200-107270800 Strong transcription Primary T regulatory cells fromperipheralblood blood
46 chr4:107265200-107271400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
47 chr4:107265600-107271600 Strong transcription Primary T cells fromperipheralblood blood
48 chr4:107266400-107271000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr4:107266400-107274600 Weak transcription Muscle Satellite Cultured Cells --
50 chr4:107266600-107273000 Weak transcription Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015