Variant report

Variant	rs314205
Chromosome Location	chr6:69857873-69857874
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs1283617	1.00[EUR][1000 genomes]
rs1512233	1.00[EUR][1000 genomes]
rs2793455	1.00[EUR][1000 genomes]
rs314195	1.00[EUR][1000 genomes]
rs314197	1.00[EUR][1000 genomes]
rs314200	1.00[EUR][1000 genomes]
rs314202	1.00[EUR][1000 genomes]
rs314203	1.00[EUR][1000 genomes]
rs314206	1.00[EUR][1000 genomes]
rs314209	1.00[EUR][1000 genomes]
rs314210	1.00[EUR][1000 genomes]
rs314221	1.00[EUR][1000 genomes]
rs3799051	1.00[EUR][1000 genomes]
rs3799055	1.00[EUR][1000 genomes]
rs3799064	1.00[EUR][1000 genomes]
rs3799067	1.00[EUR][1000 genomes]
rs4295442	1.00[EUR][1000 genomes]
rs4295443	1.00[EUR][1000 genomes]
rs4639298	1.00[EUR][1000 genomes]
rs6908986	1.00[EUR][1000 genomes]
rs6926984	1.00[EUR][1000 genomes]
rs6939422	1.00[EUR][1000 genomes]
rs73467725	1.00[EUR][1000 genomes]
rs73469396	1.00[EUR][1000 genomes]
rs7744929	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886137	chr6:69684850-70095690	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	esv2754259	chr6:69825681-69858930	Enhancers Weak transcription ZNF genes & repeats Active TSS	n/a	n/a	inside rSNPs	diseases
3	nsv526130	chr6:69851816-69922327	Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv1029637	chr6:69855697-69916758	Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:69856200-69859600	Weak transcription	Fetal Lung	lung
2	chr6:69856400-69861600	Weak transcription	Fetal Brain Female	brain
3	chr6:69856400-69874000	Weak transcription	Brain Angular Gyrus	brain

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links