Variant report

Variant rs334552
Chromosome Location chr3:119796455-119796456
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:119760200-119805400 Weak transcription HMEC breast
2 chr3:119764600-119812000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr3:119769200-119804400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr3:119771400-119809400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr3:119771800-119805400 Weak transcription NHEK skin
6 chr3:119773200-119807600 Weak transcription Right Ventricle heart
7 chr3:119775800-119797600 Weak transcription Fetal Thymus thymus
8 chr3:119779400-119804200 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr3:119779400-119807400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr3:119779600-119800200 Weak transcription Fetal Adrenal Gland Adrenal Gland
11 chr3:119779600-119807800 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr3:119780600-119807800 Weak transcription HUES64 Cell Line embryonic stem cell
13 chr3:119784400-119797200 Weak transcription Thymus Thymus
14 chr3:119785400-119796800 Weak transcription Dnd41 blood
15 chr3:119786600-119797600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr3:119788400-119805400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr3:119788400-119808600 Weak transcription Primary B cells from cord blood blood
18 chr3:119789400-119797000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr3:119789400-119809200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr3:119789800-119797200 Weak transcription Primary T killer memory cells from peripheral blood blood
21 chr3:119789800-119807800 Weak transcription Primary B cells from peripheral blood blood
22 chr3:119790000-119797800 Weak transcription Duodenum Mucosa Duodenum
23 chr3:119790000-119807600 Weak transcription Liver Liver
24 chr3:119790200-119805000 Weak transcription HepG2 liver
25 chr3:119790400-119800000 Weak transcription Spleen Spleen
26 chr3:119790400-119800600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr3:119790400-119805200 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr3:119790600-119797200 Weak transcription Primary T cells from cord blood blood
29 chr3:119790600-119797600 Weak transcription Right Atrium heart
30 chr3:119790600-119797800 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr3:119790600-119807400 Weak transcription Brain Substantia Nigra brain
32 chr3:119790600-119807800 Weak transcription iPS-18 Cell Line embryonic stem cell
33 chr3:119790600-119809200 Weak transcription HUES6 Cell Line embryonic stem cell
34 chr3:119790800-119808000 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr3:119790800-119809200 Weak transcription HUES48 Cell Line embryonic stem cell
36 chr3:119790800-119809400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr3:119791000-119809600 Weak transcription Fetal Muscle Leg muscle
38 chr3:119791200-119797200 Weak transcription Primary T helper cells fromperipheralblood blood
39 chr3:119791400-119798800 Weak transcription Fetal Intestine Small intestine
40 chr3:119791800-119797800 Weak transcription Psoas Muscle Psoas
41 chr3:119792000-119796800 Weak transcription Primary T helper cells PMA-I stimulated --
42 chr3:119792000-119797400 Weak transcription Primary T killer naive cells fromperipheralblood blood
43 chr3:119792400-119798200 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr3:119793000-119807400 Weak transcription Primary hematopoietic stem cells short term culture blood
45 chr3:119793200-119797400 Weak transcription Primary T cells fromperipheralblood blood
46 chr3:119793200-119797400 Weak transcription Left Ventricle heart
47 chr3:119793200-119799400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr3:119793200-119805400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
49 chr3:119793600-119797600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
50 chr3:119795000-119799400 Weak transcription Small Intestine intestine

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