The 2.0 version of rSNPBase

Variant report

Variant rs6805931
Chromosome Location chr3:119784746-119784747
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:119759400-119786200 Weak transcription Hela-S3 cervix
2 chr3:119760200-119805400 Weak transcription HMEC breast
3 chr3:119764600-119812000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr3:119768800-119792800 Weak transcription Fetal Stomach stomach
5 chr3:119769200-119804400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr3:119769800-119784800 Weak transcription Dnd41 blood
7 chr3:119771400-119809400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
8 chr3:119771800-119805400 Weak transcription NHEK skin
9 chr3:119773200-119807600 Weak transcription Right Ventricle heart
10 chr3:119773800-119787800 Weak transcription Primary hematopoietic stem cells short term culture blood
11 chr3:119774000-119789600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr3:119775800-119790400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr3:119775800-119796000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr3:119775800-119797600 Weak transcription Fetal Thymus thymus
15 chr3:119778600-119786400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr3:119778800-119786000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr3:119778800-119787800 Weak transcription Primary B cells from cord blood blood
18 chr3:119778800-119791200 Weak transcription Fetal Brain Female brain
19 chr3:119778800-119796000 Weak transcription NHDF-Ad bronchial
20 chr3:119778800-119796400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr3:119779000-119788200 Weak transcription iPS-18 Cell Line embryonic stem cell
22 chr3:119779200-119789200 Weak transcription Primary T regulatory cells fromperipheralblood blood
23 chr3:119779200-119789200 Weak transcription Duodenum Mucosa Duodenum
24 chr3:119779200-119789200 Weak transcription A549 lung
25 chr3:119779400-119789200 Weak transcription Brain Hippocampus Middle brain
26 chr3:119779400-119804200 Weak transcription Breast Myoepithelial Primary Cells Breast
27 chr3:119779400-119807400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr3:119779600-119786400 Weak transcription Primary T helper naive cells fromperipheralblood blood
29 chr3:119779600-119787800 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr3:119779600-119789200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr3:119779600-119789600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr3:119779600-119789800 Weak transcription Small Intestine intestine
33 chr3:119779600-119793000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
34 chr3:119779600-119800200 Weak transcription Fetal Adrenal Gland Adrenal Gland
35 chr3:119779600-119807800 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr3:119779800-119786200 Weak transcription HUES48 Cell Line embryonic stem cell
37 chr3:119779800-119793000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
38 chr3:119780000-119786400 Weak transcription iPS-20b Cell Line embryonic stem cell
39 chr3:119780000-119788200 Weak transcription Primary T killer memory cells from peripheral blood blood
40 chr3:119780400-119785400 Weak transcription Primary T helper cells fromperipheralblood blood
41 chr3:119780600-119807800 Weak transcription HUES64 Cell Line embryonic stem cell
42 chr3:119781800-119788000 Weak transcription Primary T helper naive cells from peripheral blood blood
43 chr3:119782000-119789800 Weak transcription Colon Smooth Muscle Colon
44 chr3:119782800-119790200 Weak transcription Primary T cells fromperipheralblood blood
45 chr3:119783400-119785200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
46 chr3:119783400-119786200 Weak transcription Adipose Nuclei Adipose
47 chr3:119783600-119785200 ZNF genes & repeats GM12878-XiMat blood
48 chr3:119783600-119789600 Weak transcription HepG2 liver
49 chr3:119783800-119789200 Weak transcription Brain Anterior Caudate brain
50 chr3:119784000-119785000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood

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Last update: Aug 31, 2015