Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs1333984	0.84[ASW][hapmap];0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.88[LWK][hapmap];0.81[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs1556571	0.86[ASN][1000 genomes]
rs1556572	0.97[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs1556573	0.84[ASW][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap];0.96[LWK][hapmap];0.93[YRI][hapmap];0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs168056	0.85[AFR][1000 genomes]
rs1855439	0.86[ASN][1000 genomes]
rs186764	0.89[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs336204	0.94[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs372641	0.97[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs375176	0.97[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs422209	0.81[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs452964	0.87[ASN][1000 genomes]
rs72670106	0.94[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs8000582	0.97[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs9555649	0.97[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs9559672	0.97[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs9559673	0.97[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs9634587	0.97[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs9634589	0.81[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs9634590	0.87[ASN][1000 genomes]
rs9989064	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832719	chr13:110512259-110655883	Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:110522600-110537000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr13:110528800-110537000	Weak transcription	Right Atrium	heart
3	chr13:110529000-110537000	Weak transcription	Right Ventricle	heart
4	chr13:110535600-110537400	Enhancers	Left Ventricle	heart
5	chr13:110536400-110537600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
6	chr13:110536800-110537400	Enhancers	HSMMtube	muscle

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