Variant report

Variant	rs34066880
Chromosome Location	chr3:132994433-132994434
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs10512891	0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10512896	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13072106	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13091006	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13097026	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16840161	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1708373	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17297332	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1842156	0.81[ASN][1000 genomes]
rs1849505	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1920021	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2137602	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs33998360	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34391675	0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34413700	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs34707548	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs35128664	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35147454	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35186564	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35356925	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35770748	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs35785369	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35971054	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4130892	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs66572811	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs67100501	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs67196950	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67607639	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67625558	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs71315696	1.00[ASN][1000 genomes]
rs71315702	1.00[ASN][1000 genomes]
rs73207714	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73863529	0.81[ASN][1000 genomes]
rs7612595	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7625110	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7650741	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:132984000-132994800	Weak transcription	HSMMtube	muscle
2	chr3:132985400-133002800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr3:132988000-132995200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
4	chr3:132988400-132998400	Weak transcription	Skeletal Muscle Male	skeletal muscle
5	chr3:132988800-132995600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
6	chr3:132988800-133002800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr3:132989600-132995600	Weak transcription	Psoas Muscle	Psoas
8	chr3:132990200-133002800	Weak transcription	Lung	lung
9	chr3:132990600-133002800	Weak transcription	Right Atrium	heart
10	chr3:132990800-132994600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
11	chr3:132990800-132995200	Weak transcription	HUES48 Cell Line	embryonic stem cell
12	chr3:132990800-132995400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
13	chr3:132991200-132994800	Weak transcription	Fetal Brain Male	brain
14	chr3:132991600-132996600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
15	chr3:132991800-132995600	Weak transcription	Fetal Lung	lung
16	chr3:132993800-132995400	Weak transcription	HUES64 Cell Line	embryonic stem cell
17	chr3:132994200-132999800	Enhancers	Cortex derived primary cultured neurospheres	brain
18	chr3:132994400-132996600	Enhancers	Fetal Brain Female	brain

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