Variant report

Variant	rs34093858
Chromosome Location	chr8:129807998-129807999
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:129805990..129808282-chr8:129810250..129812846,2	MCF-7	breast:

Extended variants
information (count: 42 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs12541496	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12541508	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12544343	0.84[EUR][1000 genomes]
rs12544345	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12548216	0.82[EUR][1000 genomes]
rs12548853	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12549424	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12549751	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13250924	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs13257555	0.84[EUR][1000 genomes]
rs13269457	0.84[EUR][1000 genomes]
rs13269648	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13272774	0.84[EUR][1000 genomes]
rs13273255	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs13275784	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs13280887	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1596125	0.84[EUR][1000 genomes]
rs16903682	0.86[EUR][1000 genomes]
rs2028517	0.86[EUR][1000 genomes]
rs34757177	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34825160	0.86[EUR][1000 genomes]
rs35055513	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs35081453	0.86[EUR][1000 genomes]
rs35181074	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs35296092	0.86[EUR][1000 genomes]
rs35299722	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs35643497	0.86[EUR][1000 genomes]
rs35697214	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35950030	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs35960460	0.84[EUR][1000 genomes]
rs35989243	0.83[EUR][1000 genomes]
rs36040241	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs36141457	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs36142507	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56884764	0.86[EUR][1000 genomes]
rs57630172	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs58015045	0.84[EUR][1000 genomes]
rs61025881	0.84[EUR][1000 genomes]
rs61580176	0.84[EUR][1000 genomes]
rs67628488	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73373832	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs73385409	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:129784000-129809800	Weak transcription	Dnd41	blood
2	chr8:129805400-129808200	Enhancers	Cortex derived primary cultured neurospheres	brain
3	chr8:129806000-129808200	Enhancers	Fetal Muscle Leg	muscle
4	chr8:129806000-129808600	Weak transcription	Pancreatic Islets	Pancreatic Islet
5	chr8:129807000-129812200	Weak transcription	Fetal Intestine Small	intestine
6	chr8:129807000-129820800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr8:129807600-129811600	Weak transcription	Muscle Satellite Cultured Cells	--
8	chr8:129807600-129812000	Weak transcription	Fetal Stomach	stomach

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