Variant report

Variant	rs35950030
Chromosome Location	chr8:129900687-129900688
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 42 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs11779586	0.82[AFR][1000 genomes]
rs12541496	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12541508	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12544343	0.92[EUR][1000 genomes]
rs12544345	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12548853	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12549424	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12549751	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13250924	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs13257555	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13269457	0.92[EUR][1000 genomes]
rs13269648	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13272774	0.92[EUR][1000 genomes]
rs13273255	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs13275784	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs13280887	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1596125	0.92[EUR][1000 genomes]
rs16903682	0.94[EUR][1000 genomes]
rs2028517	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs34093858	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs34757177	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs34825160	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs35055513	1.00[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs35081453	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs35181074	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs35296092	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs35299722	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs35643497	0.94[EUR][1000 genomes]
rs35697214	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs35960460	0.92[EUR][1000 genomes]
rs35989243	0.90[EUR][1000 genomes]
rs36040241	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs36141457	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs36142507	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs56884764	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs57630172	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs58015045	0.92[EUR][1000 genomes]
rs61025881	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs61580176	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs67628488	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs73373832	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs73385409	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:129896400-129901200	Weak transcription	NHLF	lung
2	chr8:129896400-129902400	Weak transcription	HSMM	muscle
3	chr8:129896400-129902800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr8:129896400-129902800	Weak transcription	Osteobl	bone
5	chr8:129896800-129902800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr8:129896800-129903200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr8:129898200-129903200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr8:129899600-129909800	Weak transcription	Dnd41	blood
9	chr8:129900600-129902800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr8:129900600-129902800	Weak transcription	NHDF-Ad	bronchial

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