Variant report

Variant	rs34106842
Chromosome Location	chr4:26295058-26295059
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:26295031..26297895-chr4:26300560..26302361,2	K562	blood:

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10005675	0.83[EUR][1000 genomes]
rs10012023	0.83[EUR][1000 genomes]
rs11944224	1.00[EUR][1000 genomes]
rs12500365	0.83[EUR][1000 genomes]
rs12500372	0.83[EUR][1000 genomes]
rs12505980	0.83[EUR][1000 genomes]
rs12512565	0.83[EUR][1000 genomes]
rs2725323	0.83[EUR][1000 genomes]
rs2725324	0.83[EUR][1000 genomes]
rs28521495	0.83[EUR][1000 genomes]
rs2854036	0.83[EUR][1000 genomes]
rs28584998	1.00[EUR][1000 genomes]
rs3020586	0.83[EUR][1000 genomes]
rs3020587	0.83[EUR][1000 genomes]
rs3111711	0.83[EUR][1000 genomes]
rs56174986	0.83[EUR][1000 genomes]
rs56285756	0.83[EUR][1000 genomes]
rs6835386	0.83[EUR][1000 genomes]
rs6854444	0.83[EUR][1000 genomes]
rs73113354	1.00[EUR][1000 genomes]
rs7684003	0.83[EUR][1000 genomes]
rs7697476	0.83[EUR][1000 genomes]
rs953324	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:13 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv829889	chr4:26169954-26338313	Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv593853	chr4:26286920-26295174	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	esv3467038	chr4:26290291-26295493	Flanking Active TSS Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv3467039	chr4:26290345-26295472	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv3467037	chr4:26290356-26295454	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv822510	chr4:26290417-26295069	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
7	nsv822511	chr4:26290417-26295508	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv3467036	chr4:26290453-26295391	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
9	esv3467040	chr4:26290468-26295388	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
10	esv13491	chr4:26290477-26295344	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
11	nsv822512	chr4:26290842-26295508	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
12	nsv593861	chr4:26291134-26295174	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
13	nsv593870	chr4:26292126-26295174	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:26290200-26297200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr4:26290600-26297200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr4:26290600-26297800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr4:26291400-26296800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr4:26292200-26299000	Weak transcription	Ovary	ovary
6	chr4:26292400-26299000	Weak transcription	NHDF-Ad	bronchial
7	chr4:26293200-26299000	Weak transcription	Fetal Lung	lung
8	chr4:26293400-26300000	Weak transcription	Fetal Muscle Leg	muscle
9	chr4:26294600-26295600	Enhancers	Primary neutrophils fromperipheralblood	blood
10	chr4:26294800-26295200	Enhancers	Primary monocytes fromperipheralblood	blood
11	chr4:26294800-26295400	Enhancers	Monocytes-CD14+_RO01746	blood

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