Variant report

Variant	rs6835386
Chromosome Location	chr4:26441573-26441574
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:26439953..26442346-chr4:27061840..27063686,2	K562	blood:

rs_ID	r²[population]
rs10005675	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10012023	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11944224	0.83[EUR][1000 genomes]
rs12512565	0.94[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28542502	1.00[AMR][1000 genomes]
rs28584998	0.83[EUR][1000 genomes]
rs34106842	0.83[EUR][1000 genomes]
rs6854444	0.94[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73113354	0.83[EUR][1000 genomes]
rs7684003	1.00[EUR][1000 genomes]
rs953324	0.83[EUR][1000 genomes]

Chromatin state (count:93 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:26408400-26442000	Weak transcription	Aorta	Aorta
2	chr4:26414600-26443000	Weak transcription	Fetal Brain Male	brain
3	chr4:26417200-26443600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
4	chr4:26423000-26442600	Weak transcription	Fetal Heart	heart
5	chr4:26423200-26446000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr4:26423400-26459200	Weak transcription	Thymus	Thymus
7	chr4:26425200-26441800	Strong transcription	HUES6 Cell Line	embryonic stem cell
8	chr4:26425600-26442600	Weak transcription	Stomach Mucosa	stomach
9	chr4:26428800-26442600	Weak transcription	Pancreas	Pancrea
10	chr4:26429000-26442800	Weak transcription	Psoas Muscle	Psoas
11	chr4:26431800-26444400	Weak transcription	Gastric	stomach
12	chr4:26431800-26445200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
13	chr4:26432400-26441600	Weak transcription	HUVEC	blood vessel
14	chr4:26432400-26443400	Genic enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr4:26432600-26442600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr4:26432600-26442600	Weak transcription	Brain Anterior Caudate	brain
17	chr4:26432600-26442800	Weak transcription	Esophagus	oesophagus
18	chr4:26432600-26442800	Weak transcription	Right Ventricle	heart
19	chr4:26432600-26444600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
20	chr4:26432600-26445600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
21	chr4:26432800-26442000	Weak transcription	Sigmoid Colon	Sigmoid Colon
22	chr4:26433600-26444200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
23	chr4:26433800-26441800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
24	chr4:26433800-26444200	Weak transcription	HepG2	liver
25	chr4:26434400-26442600	Weak transcription	Brain Inferior Temporal Lobe	brain
26	chr4:26434400-26443200	Weak transcription	Duodenum Smooth Muscle	Duodenum
27	chr4:26434600-26442800	Weak transcription	Skeletal Muscle Male	skeletal muscle
28	chr4:26434800-26442600	Weak transcription	Left Ventricle	heart
29	chr4:26434800-26442800	Weak transcription	Skeletal Muscle Female	skeletal muscle
30	chr4:26435000-26442800	Weak transcription	Duodenum Mucosa	Duodenum
31	chr4:26435600-26441600	Weak transcription	Liver	Liver
32	chr4:26436200-26442600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
33	chr4:26436200-26446000	Weak transcription	H1 Cell Line	embryonic stem cell
34	chr4:26436400-26442400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
35	chr4:26436400-26442600	Weak transcription	Brain Angular Gyrus	brain
36	chr4:26436400-26442600	Weak transcription	Brain Substantia Nigra	brain
37	chr4:26436400-26445800	Weak transcription	Brain Cingulate Gyrus	brain
38	chr4:26436400-26456400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
39	chr4:26436600-26442000	Weak transcription	Primary hematopoietic stem cells	blood
40	chr4:26436800-26441600	Strong transcription	Fetal Muscle Leg	muscle
41	chr4:26437600-26441600	Strong transcription	NHDF-Ad	bronchial
42	chr4:26437800-26441800	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
43	chr4:26438000-26442400	Weak transcription	Ovary	ovary
44	chr4:26438400-26442200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
45	chr4:26438400-26442200	Weak transcription	Colon Smooth Muscle	Colon
46	chr4:26438400-26442200	Weak transcription	Fetal Lung	lung
47	chr4:26438400-26442600	Weak transcription	Rectal Smooth Muscle	rectum
48	chr4:26438400-26443000	Weak transcription	HUES64 Cell Line	embryonic stem cell
49	chr4:26438600-26441800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
50	chr4:26438800-26442400	Weak transcription	HSMMtube	muscle

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