Variant report

Variant	rs34113599
Chromosome Location	chr2:144552762-144552763
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10205158	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12993352	0.92[ASN][1000 genomes]
rs13005318	0.83[ASN][1000 genomes]
rs13006296	0.83[ASN][1000 genomes]
rs13012919	0.91[ASN][1000 genomes]
rs13029549	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs13035128	0.91[ASN][1000 genomes]
rs16823166	0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1882625	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs34372952	0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs34607263	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs34924549	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs35563346	0.91[ASN][1000 genomes]
rs35864909	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36016304	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36117473	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs56354994	0.81[ASN][1000 genomes]
rs6714415	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6735072	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7564341	0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7568511	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7569139	0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7607751	0.82[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:144544200-144558000	Weak transcription	Ovary	ovary
2	chr2:144551600-144553000	Weak transcription	HUES6 Cell Line	embryonic stem cell
3	chr2:144551800-144552800	Weak transcription	Cortex derived primary cultured neurospheres	brain

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