Variant report
| Variant | rs34259292 |
|---|---|
| Chromosome Location | chr2:209320832-209320833 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr2:209318011..209319809-chr2:209319988..209321892,2 | K562 | blood: |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:40)
| rs_ID | r2[population] |
|---|---|
| rs10193961 | 1.00[ASN][1000 genomes] |
| rs10206991 | 0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs1080646 | 1.00[ASN][1000 genomes] |
| rs11891163 | 0.90[AMR][1000 genomes] |
| rs11897777 | 0.85[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs11902124 | 0.93[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs1259699 | 1.00[ASN][1000 genomes] |
| rs1259700 | 1.00[ASN][1000 genomes] |
| rs12991283 | 0.90[AMR][1000 genomes] |
| rs12998277 | 0.90[AMR][1000 genomes] |
| rs13395035 | 0.90[AMR][1000 genomes] |
| rs13397965 | 0.85[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs13400356 | 0.90[AMR][1000 genomes] |
| rs16841239 | 0.86[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs16841294 | 1.00[ASN][1000 genomes] |
| rs17718694 | 1.00[ASN][1000 genomes] |
| rs28885800 | 0.90[AMR][1000 genomes] |
| rs35217101 | 0.90[AMR][1000 genomes] |
| rs35293936 | 0.90[AMR][1000 genomes] |
| rs61082488 | 1.00[ASN][1000 genomes] |
| rs61193569 | 0.93[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs66521274 | 1.00[ASN][1000 genomes] |
| rs66700780 | 1.00[ASN][1000 genomes] |
| rs6716615 | 1.00[ASN][1000 genomes] |
| rs67168689 | 1.00[ASN][1000 genomes] |
| rs6717082 | 1.00[ASN][1000 genomes] |
| rs67393765 | 0.93[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs67660353 | 0.90[AMR][1000 genomes] |
| rs67757182 | 0.93[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs67984155 | 1.00[ASN][1000 genomes] |
| rs68112042 | 1.00[ASN][1000 genomes] |
| rs72981015 | 1.00[ASN][1000 genomes] |
| rs72981030 | 1.00[ASN][1000 genomes] |
| rs72981046 | 1.00[ASN][1000 genomes] |
| rs72981047 | 1.00[ASN][1000 genomes] |
| rs72986744 | 0.93[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7563597 | 0.90[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7570304 | 1.00[ASN][1000 genomes] |
| rs7586219 | 1.00[ASN][1000 genomes] |
| rs7608913 | 0.93[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr2:209320400-209321200 | Enhancers | HUES48 Cell Line | embryonic stem cell |
