Variant report

Variant	rs61082488
Chromosome Location	chr2:209412649-209412650
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:209405403..209410609-chr2:209410620..209413858,6	K562	blood:
2	chr2:209405990..209410694-chr2:209410728..209415214,7	K562	blood:

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs10193961	1.00[ASN][1000 genomes]
rs10206991	1.00[ASN][1000 genomes]
rs1080646	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11897777	1.00[ASN][1000 genomes]
rs11902124	1.00[ASN][1000 genomes]
rs1259699	1.00[ASN][1000 genomes]
rs1259700	1.00[ASN][1000 genomes]
rs13397965	1.00[ASN][1000 genomes]
rs16841239	1.00[ASN][1000 genomes]
rs16841294	1.00[ASN][1000 genomes]
rs17718694	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34259292	1.00[ASN][1000 genomes]
rs55920681	0.80[AMR][1000 genomes]
rs59761715	0.80[AMR][1000 genomes]
rs60524525	0.80[AMR][1000 genomes]
rs61193569	1.00[ASN][1000 genomes]
rs66478682	0.80[AMR][1000 genomes]
rs66521274	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66552766	0.80[AMR][1000 genomes]
rs66682063	0.80[AMR][1000 genomes]
rs66700780	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6716615	1.00[ASN][1000 genomes]
rs67168689	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6717082	1.00[ASN][1000 genomes]
rs67393765	1.00[ASN][1000 genomes]
rs67757182	1.00[ASN][1000 genomes]
rs67984155	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs68112042	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72981015	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72981030	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72981046	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72981047	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72986744	1.00[ASN][1000 genomes]
rs72990613	0.82[AMR][1000 genomes]
rs7563597	1.00[ASN][1000 genomes]
rs7570304	1.00[ASN][1000 genomes]
rs7586219	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7608913	1.00[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:209407800-209414400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr2:209410600-209414200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
3	chr2:209410800-209412800	Enhancers	Duodenum Mucosa	Duodenum
4	chr2:209410800-209412800	Weak transcription	Small Intestine	intestine
5	chr2:209411200-209414000	Weak transcription	Rectal Mucosa Donor 31	rectum
6	chr2:209411400-209413600	Weak transcription	K562	blood

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