The 2.0 version of rSNPBase

Variant report

Variant rs34268421
Chromosome Location chr6:26417192-26417193
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:26403000-26421200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr6:26403000-26421200 Weak transcription Right Ventricle heart
3 chr6:26403200-26420200 Weak transcription HSMMtube muscle
4 chr6:26403200-26421000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr6:26403200-26421000 Weak transcription NHDF-Ad bronchial
6 chr6:26403400-26418200 Weak transcription Brain Cingulate Gyrus brain
7 chr6:26403400-26418200 Weak transcription Brain Germinal Matrix brain
8 chr6:26403400-26421000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr6:26403400-26421000 Weak transcription Placenta Amnion Placenta Amnion
10 chr6:26403400-26421000 Weak transcription Right Atrium heart
11 chr6:26403600-26421200 Weak transcription Psoas Muscle Psoas
12 chr6:26405200-26421000 Weak transcription Stomach Mucosa stomach
13 chr6:26405800-26421200 Weak transcription Small Intestine intestine
14 chr6:26407000-26420400 Weak transcription Fetal Brain Male brain
15 chr6:26407800-26420600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr6:26407800-26420600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr6:26407800-26420600 Weak transcription Fetal Kidney kidney
18 chr6:26407800-26420800 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr6:26408000-26421000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr6:26408200-26420200 Weak transcription Pancreas Pancrea
21 chr6:26410000-26420200 Weak transcription Aorta Aorta
22 chr6:26410200-26417800 Strong transcription Primary T cells fromperipheralblood blood
23 chr6:26410800-26420600 Weak transcription Colon Smooth Muscle Colon
24 chr6:26412000-26421000 Weak transcription Rectal Smooth Muscle rectum
25 chr6:26412200-26420600 Weak transcription Brain Hippocampus Middle brain
26 chr6:26412200-26421000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr6:26412400-26421000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
28 chr6:26412600-26420200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr6:26412600-26420800 Weak transcription Muscle Satellite Cultured Cells --
30 chr6:26412600-26421000 Weak transcription Osteobl bone
31 chr6:26412800-26421000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr6:26412800-26421000 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr6:26413000-26421000 Weak transcription Ovary ovary
34 chr6:26413200-26420800 Weak transcription Primary T killer naive cells fromperipheralblood blood
35 chr6:26413200-26421000 Weak transcription Colonic Mucosa Colon
36 chr6:26413600-26417600 Weak transcription Fetal Lung lung
37 chr6:26413600-26418200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr6:26413600-26420400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
39 chr6:26413600-26421600 Weak transcription Gastric stomach
40 chr6:26413800-26420200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr6:26413800-26421000 Weak transcription Esophagus oesophagus
42 chr6:26413800-26421000 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr6:26413800-26421000 Weak transcription Skeletal Muscle Female skeletal muscle
44 chr6:26414000-26420200 Weak transcription Spleen Spleen
45 chr6:26414000-26420800 Weak transcription Stomach Smooth Muscle stomach
46 chr6:26414000-26421200 Weak transcription Left Ventricle heart
47 chr6:26414200-26417400 Weak transcription Primary T helper cells PMA-I stimulated --
48 chr6:26414200-26420600 Weak transcription Duodenum Mucosa Duodenum
49 chr6:26414200-26420800 Weak transcription NHLF lung
50 chr6:26414400-26421000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood

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Last update: Aug 31, 2015