The 2.0 version of rSNPBase

Variant report

Variant rs10946830
Chromosome Location chr6:26430658-26430659
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:26422200-26439800 Weak transcription Placenta Amnion Placenta Amnion
2 chr6:26422400-26431000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr6:26422400-26432000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr6:26422400-26439400 Weak transcription Primary T cells from cord blood blood
5 chr6:26422400-26439400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr6:26422400-26439600 Weak transcription Thymus Thymus
7 chr6:26422600-26430800 Weak transcription A549 lung
8 chr6:26422600-26431000 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr6:26422600-26431000 Weak transcription HUES48 Cell Line embryonic stem cell
10 chr6:26422600-26431000 Weak transcription iPS-20b Cell Line embryonic stem cell
11 chr6:26422600-26431200 Weak transcription Fetal Thymus thymus
12 chr6:26422600-26431400 Weak transcription Primary monocytes fromperipheralblood blood
13 chr6:26422600-26432600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr6:26422600-26432800 Weak transcription Primary hematopoietic stem cells short term culture blood
15 chr6:26422600-26434200 Weak transcription iPS-15b Cell Line embryonic stem cell
16 chr6:26422600-26434400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr6:26422600-26434600 Weak transcription Primary hematopoietic stem cells blood
18 chr6:26422600-26439400 Weak transcription HMEC breast
19 chr6:26422600-26439600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
20 chr6:26422600-26439800 Weak transcription Primary B cells from cord blood blood
21 chr6:26422600-26440000 Weak transcription Psoas Muscle Psoas
22 chr6:26423000-26431000 Weak transcription HUES64 Cell Line embryonic stem cell
23 chr6:26423000-26431600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
24 chr6:26423000-26433200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
25 chr6:26423200-26432600 Strong transcription Fetal Adrenal Gland Adrenal Gland
26 chr6:26423200-26432800 Weak transcription GM12878-XiMat blood
27 chr6:26423200-26440000 Weak transcription Colonic Mucosa Colon
28 chr6:26423400-26431000 Weak transcription Rectal Smooth Muscle rectum
29 chr6:26423400-26431200 Weak transcription Gastric stomach
30 chr6:26423400-26431400 Weak transcription Brain Substantia Nigra brain
31 chr6:26423600-26439400 Weak transcription Primary T cells fromperipheralblood blood
32 chr6:26423600-26440400 Weak transcription Right Ventricle heart
33 chr6:26423800-26431000 Weak transcription NHEK skin
34 chr6:26423800-26431400 Weak transcription Pancreas Pancrea
35 chr6:26423800-26439600 Weak transcription Colon Smooth Muscle Colon
36 chr6:26423800-26439800 Weak transcription Hela-S3 cervix
37 chr6:26424800-26431400 Weak transcription Right Atrium heart
38 chr6:26424800-26431600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr6:26424800-26431800 Weak transcription Aorta Aorta
40 chr6:26424800-26433400 Weak transcription Esophagus oesophagus
41 chr6:26425000-26433400 Strong transcription Fetal Muscle Leg muscle
42 chr6:26425200-26432600 Strong transcription Fetal Muscle Trunk muscle
43 chr6:26425400-26431200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr6:26425400-26431200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr6:26425400-26432400 Strong transcription HSMM muscle
46 chr6:26425600-26432400 Strong transcription Fetal Intestine Large intestine
47 chr6:26425600-26432600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr6:26425600-26432600 Strong transcription Fetal Lung lung
49 chr6:26425600-26433400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr6:26425800-26432400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015